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Predictive QSAR Models for the Toxicity of Disinfection Byproducts
Several hundred disinfection byproducts (DBPs) in drinking water have been identified, and are known to have potentially adverse health effects. There are toxicological data gaps for most DBPs, and the predictive method may provide an effective way to address this. The development of an in-silico mo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6151816/ https://www.ncbi.nlm.nih.gov/pubmed/28991213 http://dx.doi.org/10.3390/molecules22101671 |
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author | Qin, Litang Zhang, Xin Chen, Yuhan Mo, Lingyun Zeng, Honghu Liang, Yanpeng |
author_facet | Qin, Litang Zhang, Xin Chen, Yuhan Mo, Lingyun Zeng, Honghu Liang, Yanpeng |
author_sort | Qin, Litang |
collection | PubMed |
description | Several hundred disinfection byproducts (DBPs) in drinking water have been identified, and are known to have potentially adverse health effects. There are toxicological data gaps for most DBPs, and the predictive method may provide an effective way to address this. The development of an in-silico model of toxicology endpoints of DBPs is rarely studied. The main aim of the present study is to develop predictive quantitative structure–activity relationship (QSAR) models for the reactive toxicities of 50 DBPs in the five bioassays of X-Microtox, GSH+, GSH−, DNA+ and DNA−. All-subset regression was used to select the optimal descriptors, and multiple linear-regression models were built. The developed QSAR models for five endpoints satisfied the internal and external validation criteria: coefficient of determination (R(2)) > 0.7, explained variance in leave-one-out prediction (Q(2)(LOO)) and in leave-many-out prediction (Q(2)(LMO)) > 0.6, variance explained in external prediction (Q(2)(F1), Q(2)(F2), and Q(2)(F3)) > 0.7, and concordance correlation coefficient (CCC) > 0.85. The application domains and the meaning of the selective descriptors for the QSAR models were discussed. The obtained QSAR models can be used in predicting the toxicities of the 50 DBPs. |
format | Online Article Text |
id | pubmed-6151816 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61518162018-11-13 Predictive QSAR Models for the Toxicity of Disinfection Byproducts Qin, Litang Zhang, Xin Chen, Yuhan Mo, Lingyun Zeng, Honghu Liang, Yanpeng Molecules Article Several hundred disinfection byproducts (DBPs) in drinking water have been identified, and are known to have potentially adverse health effects. There are toxicological data gaps for most DBPs, and the predictive method may provide an effective way to address this. The development of an in-silico model of toxicology endpoints of DBPs is rarely studied. The main aim of the present study is to develop predictive quantitative structure–activity relationship (QSAR) models for the reactive toxicities of 50 DBPs in the five bioassays of X-Microtox, GSH+, GSH−, DNA+ and DNA−. All-subset regression was used to select the optimal descriptors, and multiple linear-regression models were built. The developed QSAR models for five endpoints satisfied the internal and external validation criteria: coefficient of determination (R(2)) > 0.7, explained variance in leave-one-out prediction (Q(2)(LOO)) and in leave-many-out prediction (Q(2)(LMO)) > 0.6, variance explained in external prediction (Q(2)(F1), Q(2)(F2), and Q(2)(F3)) > 0.7, and concordance correlation coefficient (CCC) > 0.85. The application domains and the meaning of the selective descriptors for the QSAR models were discussed. The obtained QSAR models can be used in predicting the toxicities of the 50 DBPs. MDPI 2017-10-09 /pmc/articles/PMC6151816/ /pubmed/28991213 http://dx.doi.org/10.3390/molecules22101671 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Qin, Litang Zhang, Xin Chen, Yuhan Mo, Lingyun Zeng, Honghu Liang, Yanpeng Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title | Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title_full | Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title_fullStr | Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title_full_unstemmed | Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title_short | Predictive QSAR Models for the Toxicity of Disinfection Byproducts |
title_sort | predictive qsar models for the toxicity of disinfection byproducts |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6151816/ https://www.ncbi.nlm.nih.gov/pubmed/28991213 http://dx.doi.org/10.3390/molecules22101671 |
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