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Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome
There is accumulating evidence that spontaneous fluctuations of the brain are sustained by a structural architecture of axonal fiber bundles. Various models have been used to investigate this structure–function relationship. In this work, we implemented the Ising model using the number of fibers bet...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mary Ann Liebert, Inc., publishers
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6152861/ https://www.ncbi.nlm.nih.gov/pubmed/29936876 http://dx.doi.org/10.1089/brain.2017.0516 |
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author | Abeyasinghe, Pubuditha M. Ribeiro de Paula, Demetrius Khajehabdollahi, Sina Valluri, Sree Ram Owen, Adrian M. Soddu, Andrea |
author_facet | Abeyasinghe, Pubuditha M. Ribeiro de Paula, Demetrius Khajehabdollahi, Sina Valluri, Sree Ram Owen, Adrian M. Soddu, Andrea |
author_sort | Abeyasinghe, Pubuditha M. |
collection | PubMed |
description | There is accumulating evidence that spontaneous fluctuations of the brain are sustained by a structural architecture of axonal fiber bundles. Various models have been used to investigate this structure–function relationship. In this work, we implemented the Ising model using the number of fibers between each pair of brain regions as input. The output of the Ising model simulations on a structural connectome was then compared with empirical functional connectivity data. A simpler two-dimensional classical Ising model was used as the baseline model for comparison purpose. Thermodynamic properties, such as the magnetic susceptibility and the specific heat, illustrated a phase transition from an ordered phase to a disordered phase at the critical temperature. Despite the differences between the two models, the lattice Ising model and the Ising model implemented on a structural connectome (the generalized Ising model) exhibited similar patterns of global properties. To study the behavior of the generalized Ising model around criticality, calculation of the dimensionality and critical exponents was performed for the first time, by introducing a new concept of distance based on structural connectivity. Same value inside the fitting error was found for the dimensionality in both models suggesting similar behavior of the models around criticality. |
format | Online Article Text |
id | pubmed-6152861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Mary Ann Liebert, Inc., publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-61528612018-09-25 Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome Abeyasinghe, Pubuditha M. Ribeiro de Paula, Demetrius Khajehabdollahi, Sina Valluri, Sree Ram Owen, Adrian M. Soddu, Andrea Brain Connect Original Articles There is accumulating evidence that spontaneous fluctuations of the brain are sustained by a structural architecture of axonal fiber bundles. Various models have been used to investigate this structure–function relationship. In this work, we implemented the Ising model using the number of fibers between each pair of brain regions as input. The output of the Ising model simulations on a structural connectome was then compared with empirical functional connectivity data. A simpler two-dimensional classical Ising model was used as the baseline model for comparison purpose. Thermodynamic properties, such as the magnetic susceptibility and the specific heat, illustrated a phase transition from an ordered phase to a disordered phase at the critical temperature. Despite the differences between the two models, the lattice Ising model and the Ising model implemented on a structural connectome (the generalized Ising model) exhibited similar patterns of global properties. To study the behavior of the generalized Ising model around criticality, calculation of the dimensionality and critical exponents was performed for the first time, by introducing a new concept of distance based on structural connectivity. Same value inside the fitting error was found for the dimensionality in both models suggesting similar behavior of the models around criticality. Mary Ann Liebert, Inc., publishers 2018-09-01 2018-09-17 /pmc/articles/PMC6152861/ /pubmed/29936876 http://dx.doi.org/10.1089/brain.2017.0516 Text en © Pubuditha M. Abeyasinghe et al. 2018; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons Attribution Noncommercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and the source are cited. |
spellingShingle | Original Articles Abeyasinghe, Pubuditha M. Ribeiro de Paula, Demetrius Khajehabdollahi, Sina Valluri, Sree Ram Owen, Adrian M. Soddu, Andrea Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title | Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title_full | Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title_fullStr | Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title_full_unstemmed | Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title_short | Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome |
title_sort | role of dimensionality in predicting the spontaneous behavior of the brain using the classical ising model and the ising model implemented on a structural connectome |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6152861/ https://www.ncbi.nlm.nih.gov/pubmed/29936876 http://dx.doi.org/10.1089/brain.2017.0516 |
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