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A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules

A novel framework for the classification of lung nodules using computed tomography scans is proposed in this article. To get an accurate diagnosis of the detected lung nodules, the proposed framework integrates the following 2 groups of features: (1) appearance features modeled using the higher orde...

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Autores principales: Shaffie, Ahmed, Soliman, Ahmed, Fraiwan, Luay, Ghazal, Mohammed, Taher, Fatma, Dunlap, Neal, Wang, Brian, van Berkel, Victor, Keynton, Robert, Elmaghraby, Adel, El-Baz, Ayman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6153532/
https://www.ncbi.nlm.nih.gov/pubmed/30244648
http://dx.doi.org/10.1177/1533033818798800
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author Shaffie, Ahmed
Soliman, Ahmed
Fraiwan, Luay
Ghazal, Mohammed
Taher, Fatma
Dunlap, Neal
Wang, Brian
van Berkel, Victor
Keynton, Robert
Elmaghraby, Adel
El-Baz, Ayman
author_facet Shaffie, Ahmed
Soliman, Ahmed
Fraiwan, Luay
Ghazal, Mohammed
Taher, Fatma
Dunlap, Neal
Wang, Brian
van Berkel, Victor
Keynton, Robert
Elmaghraby, Adel
El-Baz, Ayman
author_sort Shaffie, Ahmed
collection PubMed
description A novel framework for the classification of lung nodules using computed tomography scans is proposed in this article. To get an accurate diagnosis of the detected lung nodules, the proposed framework integrates the following 2 groups of features: (1) appearance features modeled using the higher order Markov Gibbs random field model that has the ability to describe the spatial inhomogeneities inside the lung nodule and (2) geometric features that describe the shape geometry of the lung nodules. The novelty of this article is to accurately model the appearance of the detected lung nodules using a new developed seventh-order Markov Gibbs random field model that has the ability to model the existing spatial inhomogeneities for both small and large detected lung nodules, in addition to the integration with the extracted geometric features. Finally, a deep autoencoder classifier is fed by the above 2 feature groups to distinguish between the malignant and benign nodules. To evaluate the proposed framework, we used the publicly available data from the Lung Image Database Consortium. We used a total of 727 nodules that were collected from 467 patients. The proposed system demonstrates the promise to be a valuable tool for the detection of lung cancer evidenced by achieving a nodule classification accuracy of 91.20%.
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spelling pubmed-61535322018-09-27 A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules Shaffie, Ahmed Soliman, Ahmed Fraiwan, Luay Ghazal, Mohammed Taher, Fatma Dunlap, Neal Wang, Brian van Berkel, Victor Keynton, Robert Elmaghraby, Adel El-Baz, Ayman Technol Cancer Res Treat Deep Learning in Molecular Imaging-Original Article A novel framework for the classification of lung nodules using computed tomography scans is proposed in this article. To get an accurate diagnosis of the detected lung nodules, the proposed framework integrates the following 2 groups of features: (1) appearance features modeled using the higher order Markov Gibbs random field model that has the ability to describe the spatial inhomogeneities inside the lung nodule and (2) geometric features that describe the shape geometry of the lung nodules. The novelty of this article is to accurately model the appearance of the detected lung nodules using a new developed seventh-order Markov Gibbs random field model that has the ability to model the existing spatial inhomogeneities for both small and large detected lung nodules, in addition to the integration with the extracted geometric features. Finally, a deep autoencoder classifier is fed by the above 2 feature groups to distinguish between the malignant and benign nodules. To evaluate the proposed framework, we used the publicly available data from the Lung Image Database Consortium. We used a total of 727 nodules that were collected from 467 patients. The proposed system demonstrates the promise to be a valuable tool for the detection of lung cancer evidenced by achieving a nodule classification accuracy of 91.20%. SAGE Publications 2018-09-24 /pmc/articles/PMC6153532/ /pubmed/30244648 http://dx.doi.org/10.1177/1533033818798800 Text en © The Author(s) 2018 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Deep Learning in Molecular Imaging-Original Article
Shaffie, Ahmed
Soliman, Ahmed
Fraiwan, Luay
Ghazal, Mohammed
Taher, Fatma
Dunlap, Neal
Wang, Brian
van Berkel, Victor
Keynton, Robert
Elmaghraby, Adel
El-Baz, Ayman
A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title_full A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title_fullStr A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title_full_unstemmed A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title_short A Generalized Deep Learning-Based Diagnostic System for Early Diagnosis of Various Types of Pulmonary Nodules
title_sort generalized deep learning-based diagnostic system for early diagnosis of various types of pulmonary nodules
topic Deep Learning in Molecular Imaging-Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6153532/
https://www.ncbi.nlm.nih.gov/pubmed/30244648
http://dx.doi.org/10.1177/1533033818798800
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