Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum

We used deep sequencing of the 16S rRNA gene from sputum to identify Haemophilus influenza in a patient with community-acquired pneumonia. This method may be more effective than conventional diagnostic tests in pneumonia patients because of its speed and sensitivity.

Detalles Bibliográficos
Autores principales: Moon, Jangsup, Jang, Yoonhyuk, Kim, Narae, Park, Wan Beom, Park, Kyung-Il, Lee, Soon-Tae, Jung, Keun-Hwa, Kim, Manho, Lee, Sang Kun, Chu, Kon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2018
Materias:
Research Letter
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6154133/
https://www.ncbi.nlm.nih.gov/pubmed/29989532
http://dx.doi.org/10.3201/eid2410.180234
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author Moon, Jangsup
Jang, Yoonhyuk
Kim, Narae
Park, Wan Beom
Park, Kyung-Il
Lee, Soon-Tae
Jung, Keun-Hwa
Kim, Manho
Lee, Sang Kun
Chu, Kon
author_facet Moon, Jangsup
Jang, Yoonhyuk
Kim, Narae
Park, Wan Beom
Park, Kyung-Il
Lee, Soon-Tae
Jung, Keun-Hwa
Kim, Manho
Lee, Sang Kun
Chu, Kon
author_sort Moon, Jangsup
collection PubMed
description We used deep sequencing of the 16S rRNA gene from sputum to identify Haemophilus influenza in a patient with community-acquired pneumonia. This method may be more effective than conventional diagnostic tests in pneumonia patients because of its speed and sensitivity.
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spelling pubmed-61541332018-10-01 Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum Moon, Jangsup Jang, Yoonhyuk Kim, Narae Park, Wan Beom Park, Kyung-Il Lee, Soon-Tae Jung, Keun-Hwa Kim, Manho Lee, Sang Kun Chu, Kon Emerg Infect Dis Research Letter We used deep sequencing of the 16S rRNA gene from sputum to identify Haemophilus influenza in a patient with community-acquired pneumonia. This method may be more effective than conventional diagnostic tests in pneumonia patients because of its speed and sensitivity. Centers for Disease Control and Prevention 2018-10 /pmc/articles/PMC6154133/ /pubmed/29989532 http://dx.doi.org/10.3201/eid2410.180234 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Research Letter
Moon, Jangsup
Jang, Yoonhyuk
Kim, Narae
Park, Wan Beom
Park, Kyung-Il
Lee, Soon-Tae
Jung, Keun-Hwa
Kim, Manho
Lee, Sang Kun
Chu, Kon
Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title_full Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title_fullStr Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title_full_unstemmed Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title_short Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum
title_sort diagnosis of haemophilus influenzae pneumonia by nanopore 16s amplicon sequencing of sputum
topic Research Letter
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6154133/
https://www.ncbi.nlm.nih.gov/pubmed/29989532
http://dx.doi.org/10.3201/eid2410.180234
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