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Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014

The growing availability of big data in healthcare and public health opens possibilities for infectious disease control in local settings. We prospectively evaluated a method for integrated local detection and prediction (nowcasting) of influenza epidemics over 5 years, using the total population in...

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Autores principales: Spreco, Armin, Eriksson, Olle, Dahlström, Örjan, Cowling, Benjamin John, Timpka, Toomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6154154/
https://www.ncbi.nlm.nih.gov/pubmed/30226160
http://dx.doi.org/10.3201/eid2410.171940
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author Spreco, Armin
Eriksson, Olle
Dahlström, Örjan
Cowling, Benjamin John
Timpka, Toomas
author_facet Spreco, Armin
Eriksson, Olle
Dahlström, Örjan
Cowling, Benjamin John
Timpka, Toomas
author_sort Spreco, Armin
collection PubMed
description The growing availability of big data in healthcare and public health opens possibilities for infectious disease control in local settings. We prospectively evaluated a method for integrated local detection and prediction (nowcasting) of influenza epidemics over 5 years, using the total population in Östergötland County, Sweden. We used routine health information system data on influenza-diagnosis cases and syndromic telenursing data for July 2009–June 2014 to evaluate epidemic detection, peak-timing prediction, and peak-intensity prediction. Detection performance was satisfactory throughout the period, except for the 2011–12 influenza A(H3N2) season, which followed a season with influenza B and pandemic influenza A(H1N1)pdm09 virus activity. Peak-timing prediction performance was satisfactory for the 4 influenza seasons but not the pandemic. Peak-intensity levels were correctly categorized for the pandemic and 2 of 4 influenza seasons. We recommend using versions of this method modified with regard to local use context for further evaluations using standard methods.
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spelling pubmed-61541542018-10-01 Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014 Spreco, Armin Eriksson, Olle Dahlström, Örjan Cowling, Benjamin John Timpka, Toomas Emerg Infect Dis Research The growing availability of big data in healthcare and public health opens possibilities for infectious disease control in local settings. We prospectively evaluated a method for integrated local detection and prediction (nowcasting) of influenza epidemics over 5 years, using the total population in Östergötland County, Sweden. We used routine health information system data on influenza-diagnosis cases and syndromic telenursing data for July 2009–June 2014 to evaluate epidemic detection, peak-timing prediction, and peak-intensity prediction. Detection performance was satisfactory throughout the period, except for the 2011–12 influenza A(H3N2) season, which followed a season with influenza B and pandemic influenza A(H1N1)pdm09 virus activity. Peak-timing prediction performance was satisfactory for the 4 influenza seasons but not the pandemic. Peak-intensity levels were correctly categorized for the pandemic and 2 of 4 influenza seasons. We recommend using versions of this method modified with regard to local use context for further evaluations using standard methods. Centers for Disease Control and Prevention 2018-10 /pmc/articles/PMC6154154/ /pubmed/30226160 http://dx.doi.org/10.3201/eid2410.171940 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Research
Spreco, Armin
Eriksson, Olle
Dahlström, Örjan
Cowling, Benjamin John
Timpka, Toomas
Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title_full Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title_fullStr Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title_full_unstemmed Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title_short Evaluation of Nowcasting for Detecting and Predicting Local Influenza Epidemics, Sweden, 2009–2014
title_sort evaluation of nowcasting for detecting and predicting local influenza epidemics, sweden, 2009–2014
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6154154/
https://www.ncbi.nlm.nih.gov/pubmed/30226160
http://dx.doi.org/10.3201/eid2410.171940
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