Cargando…
Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study
The present work is directed toward understanding the mechanisms of excited state deactivation in three neutral model peptides containing the phenylalanine residue. The excited state dynamics of the [Formula: see text] folded form of N-acetylphenylalaninylamide (NAPA B) and its amide-N-methylated de...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6155328/ https://www.ncbi.nlm.nih.gov/pubmed/28335582 http://dx.doi.org/10.3390/molecules22030493 |
_version_ | 1783357877417672704 |
---|---|
author | Mališ, Momir Došlić, Nađa |
author_facet | Mališ, Momir Došlić, Nađa |
author_sort | Mališ, Momir |
collection | PubMed |
description | The present work is directed toward understanding the mechanisms of excited state deactivation in three neutral model peptides containing the phenylalanine residue. The excited state dynamics of the [Formula: see text] folded form of N-acetylphenylalaninylamide (NAPA B) and its amide-N-methylated derivative (NAPMA B) is reviewed and compared to the dynamics of the monohydrated structure of NAPA (NAPAH). The goal is to unravel how the environment, and in particular solvation, impacts the photodynamics of peptides. The systems are investigated using reaction path calculations and surface hopping nonadiabatic dynamics based on the coupled cluster doubles (CC2) method and time-dependent density functional theory. The work emphasizes the role that excitation transfer from the phenyl [Formula: see text] to amide [Formula: see text] state plays in the deactivation of the three systems and shows how the ease of out-of-plane distortions of the amide group determines the rate of population transfer between the two electronic states. The subsequent dynamics on the [Formula: see text] state is barrierless along several pathways and leads to fast deactivation to the ground electronic state. |
format | Online Article Text |
id | pubmed-6155328 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61553282018-11-13 Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study Mališ, Momir Došlić, Nađa Molecules Article The present work is directed toward understanding the mechanisms of excited state deactivation in three neutral model peptides containing the phenylalanine residue. The excited state dynamics of the [Formula: see text] folded form of N-acetylphenylalaninylamide (NAPA B) and its amide-N-methylated derivative (NAPMA B) is reviewed and compared to the dynamics of the monohydrated structure of NAPA (NAPAH). The goal is to unravel how the environment, and in particular solvation, impacts the photodynamics of peptides. The systems are investigated using reaction path calculations and surface hopping nonadiabatic dynamics based on the coupled cluster doubles (CC2) method and time-dependent density functional theory. The work emphasizes the role that excitation transfer from the phenyl [Formula: see text] to amide [Formula: see text] state plays in the deactivation of the three systems and shows how the ease of out-of-plane distortions of the amide group determines the rate of population transfer between the two electronic states. The subsequent dynamics on the [Formula: see text] state is barrierless along several pathways and leads to fast deactivation to the ground electronic state. MDPI 2017-03-21 /pmc/articles/PMC6155328/ /pubmed/28335582 http://dx.doi.org/10.3390/molecules22030493 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mališ, Momir Došlić, Nađa Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title | Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title_full | Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title_fullStr | Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title_full_unstemmed | Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title_short | Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study |
title_sort | nonradiative relaxation mechanisms of uv excited phenylalanine residues: a comparative computational study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6155328/ https://www.ncbi.nlm.nih.gov/pubmed/28335582 http://dx.doi.org/10.3390/molecules22030493 |
work_keys_str_mv | AT malismomir nonradiativerelaxationmechanismsofuvexcitedphenylalanineresiduesacomparativecomputationalstudy AT doslicnađa nonradiativerelaxationmechanismsofuvexcitedphenylalanineresiduesacomparativecomputationalstudy |