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Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate

Ultrafast energy dissipation is a crucial factor for the photostability of DNA and RNA, but even some of the key electronic deactivation pathways in monomeric nucleic acid building stones are still controversial. Here, we report on the excited-state dynamics of the rare nucleotide xanthosine monopho...

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Autores principales: Röttger, Katharina, Stellmacher, Rebecca, Stuhldreier, Mayra C., Temps, Friedrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6155666/
https://www.ncbi.nlm.nih.gov/pubmed/28106804
http://dx.doi.org/10.3390/molecules22010160
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author Röttger, Katharina
Stellmacher, Rebecca
Stuhldreier, Mayra C.
Temps, Friedrich
author_facet Röttger, Katharina
Stellmacher, Rebecca
Stuhldreier, Mayra C.
Temps, Friedrich
author_sort Röttger, Katharina
collection PubMed
description Ultrafast energy dissipation is a crucial factor for the photostability of DNA and RNA, but even some of the key electronic deactivation pathways in monomeric nucleic acid building stones are still controversial. Here, we report on the excited-state dynamics of the rare nucleotide xanthosine monophosphate as a function of deprotonation state (XMP vs. XMP [Formula: see text]) and excitation wavelength ([Formula: see text] 278–243 nm) by femtosecond time-resolved fluorescence and absorption spectroscopy. We show that the predominating relaxation channel leads to a return of the photo-excited molecules to the electronic ground state in τ∼1 ps. The mechanism likely involves an out-of-plane deformation of the five-membered ring, different from the main electronic deactivation pathways in the canonical purine bases adenine and guanine. The results are discussed in terms of the structural and electronic differences of XMP compared to the canonical nucleotides.
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spelling pubmed-61556662018-11-13 Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate Röttger, Katharina Stellmacher, Rebecca Stuhldreier, Mayra C. Temps, Friedrich Molecules Article Ultrafast energy dissipation is a crucial factor for the photostability of DNA and RNA, but even some of the key electronic deactivation pathways in monomeric nucleic acid building stones are still controversial. Here, we report on the excited-state dynamics of the rare nucleotide xanthosine monophosphate as a function of deprotonation state (XMP vs. XMP [Formula: see text]) and excitation wavelength ([Formula: see text] 278–243 nm) by femtosecond time-resolved fluorescence and absorption spectroscopy. We show that the predominating relaxation channel leads to a return of the photo-excited molecules to the electronic ground state in τ∼1 ps. The mechanism likely involves an out-of-plane deformation of the five-membered ring, different from the main electronic deactivation pathways in the canonical purine bases adenine and guanine. The results are discussed in terms of the structural and electronic differences of XMP compared to the canonical nucleotides. MDPI 2017-01-18 /pmc/articles/PMC6155666/ /pubmed/28106804 http://dx.doi.org/10.3390/molecules22010160 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Röttger, Katharina
Stellmacher, Rebecca
Stuhldreier, Mayra C.
Temps, Friedrich
Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title_full Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title_fullStr Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title_full_unstemmed Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title_short Ultrafast Electronic Deactivation Dynamics of Xanthosine Monophosphate
title_sort ultrafast electronic deactivation dynamics of xanthosine monophosphate
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6155666/
https://www.ncbi.nlm.nih.gov/pubmed/28106804
http://dx.doi.org/10.3390/molecules22010160
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