MetaboDiff: an R package for differential metabolomic analysis

SUMMARY: Comparative metabolomics comes of age through commercial vendors offering metabolomics for translational researchers outside the mass spectrometry field. The MetaboDiff packages aims to provide a low-level entry to differential metabolomic analysis with R by starting off with the table of m...

Descripción completa

Detalles Bibliográficos
Autores principales: Mock, Andreas, Warta, Rolf, Dettling, Steffen, Brors, Benedikt, Jäger, Dirk, Herold-Mende, Christel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6157071/
https://www.ncbi.nlm.nih.gov/pubmed/29718102
http://dx.doi.org/10.1093/bioinformatics/bty344
Descripción
Sumario:SUMMARY: Comparative metabolomics comes of age through commercial vendors offering metabolomics for translational researchers outside the mass spectrometry field. The MetaboDiff packages aims to provide a low-level entry to differential metabolomic analysis with R by starting off with the table of metabolite measurements. As a key functionality, MetaboDiffs offers the exploration of sample traits in a data-derived metabolic correlation network. AVAILABILITY AND IMPLEMENTATION: The MetaboDiff R package is platform-independent, available at http://github.com/andreasmock/MetaboDiff/ and released under the MIT licence. The package documentation comprises a step-by-step markdown tutorial. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Ejemplares similares