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Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment

Despite the important role of wood-inhabiting fungi (WIF) in deadwood decomposition, our knowledge of the factors shaping the dynamics of their species richness and community composition is scarce. This is due to limitations regarding the resolution of classical methods used for characterizing WIF c...

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Autores principales: Purahong, Witoon, Wubet, Tesfaye, Lentendu, Guillaume, Hoppe, Björn, Jariyavidyanont, Katalee, Arnstadt, Tobias, Baber, Kristin, Otto, Peter, Kellner, Harald, Hofrichter, Martin, Bauhus, Jürgen, Weisser, Wolfgang W., Krüger, Dirk, Schulze, Ernst-Detlef, Kahl, Tiemo, Buscot, François
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158579/
https://www.ncbi.nlm.nih.gov/pubmed/30294306
http://dx.doi.org/10.3389/fmicb.2018.02120
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author Purahong, Witoon
Wubet, Tesfaye
Lentendu, Guillaume
Hoppe, Björn
Jariyavidyanont, Katalee
Arnstadt, Tobias
Baber, Kristin
Otto, Peter
Kellner, Harald
Hofrichter, Martin
Bauhus, Jürgen
Weisser, Wolfgang W.
Krüger, Dirk
Schulze, Ernst-Detlef
Kahl, Tiemo
Buscot, François
author_facet Purahong, Witoon
Wubet, Tesfaye
Lentendu, Guillaume
Hoppe, Björn
Jariyavidyanont, Katalee
Arnstadt, Tobias
Baber, Kristin
Otto, Peter
Kellner, Harald
Hofrichter, Martin
Bauhus, Jürgen
Weisser, Wolfgang W.
Krüger, Dirk
Schulze, Ernst-Detlef
Kahl, Tiemo
Buscot, François
author_sort Purahong, Witoon
collection PubMed
description Despite the important role of wood-inhabiting fungi (WIF) in deadwood decomposition, our knowledge of the factors shaping the dynamics of their species richness and community composition is scarce. This is due to limitations regarding the resolution of classical methods used for characterizing WIF communities and to a lack of well-replicated long-term experiments with sufficient numbers of tree species. Here, we used a large scale experiment with logs of 11 tree species at an early stage of decomposition, distributed across three regions of Germany, to identify the factors shaping WIF community composition and Operational Taxonomic Unit (OTU) richness using next generation sequencing. We found that tree species identity was the most significant factor, corresponding to (P < 0.001) and explaining 10% (representing 48% of the explainable variance) of the overall WIF community composition. The next important group of variables were wood-physicochemical properties, of which wood pH was the only factor that consistently corresponded to WIF community composition. For overall WIF richness patterns, we found that approximately 20% of the total variance was explained by wood N content, location, tree species identity and wood density. It is noteworthy that the importance of determinants of WIF community composition and richness appeared to depend greatly on tree species group (broadleaved vs. coniferous) and it differed between the fungal phyla Ascomycota and Basidiomycota.
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spelling pubmed-61585792018-10-05 Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment Purahong, Witoon Wubet, Tesfaye Lentendu, Guillaume Hoppe, Björn Jariyavidyanont, Katalee Arnstadt, Tobias Baber, Kristin Otto, Peter Kellner, Harald Hofrichter, Martin Bauhus, Jürgen Weisser, Wolfgang W. Krüger, Dirk Schulze, Ernst-Detlef Kahl, Tiemo Buscot, François Front Microbiol Microbiology Despite the important role of wood-inhabiting fungi (WIF) in deadwood decomposition, our knowledge of the factors shaping the dynamics of their species richness and community composition is scarce. This is due to limitations regarding the resolution of classical methods used for characterizing WIF communities and to a lack of well-replicated long-term experiments with sufficient numbers of tree species. Here, we used a large scale experiment with logs of 11 tree species at an early stage of decomposition, distributed across three regions of Germany, to identify the factors shaping WIF community composition and Operational Taxonomic Unit (OTU) richness using next generation sequencing. We found that tree species identity was the most significant factor, corresponding to (P < 0.001) and explaining 10% (representing 48% of the explainable variance) of the overall WIF community composition. The next important group of variables were wood-physicochemical properties, of which wood pH was the only factor that consistently corresponded to WIF community composition. For overall WIF richness patterns, we found that approximately 20% of the total variance was explained by wood N content, location, tree species identity and wood density. It is noteworthy that the importance of determinants of WIF community composition and richness appeared to depend greatly on tree species group (broadleaved vs. coniferous) and it differed between the fungal phyla Ascomycota and Basidiomycota. Frontiers Media S.A. 2018-09-20 /pmc/articles/PMC6158579/ /pubmed/30294306 http://dx.doi.org/10.3389/fmicb.2018.02120 Text en Copyright © 2018 Purahong, Wubet, Lentendu, Hoppe, Jariyavidyanont, Arnstadt, Baber, Otto, Kellner, Hofrichter, Bauhus, Weisser, Krüger, Schulze, Kahl and Buscot. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Purahong, Witoon
Wubet, Tesfaye
Lentendu, Guillaume
Hoppe, Björn
Jariyavidyanont, Katalee
Arnstadt, Tobias
Baber, Kristin
Otto, Peter
Kellner, Harald
Hofrichter, Martin
Bauhus, Jürgen
Weisser, Wolfgang W.
Krüger, Dirk
Schulze, Ernst-Detlef
Kahl, Tiemo
Buscot, François
Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title_full Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title_fullStr Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title_full_unstemmed Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title_short Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
title_sort determinants of deadwood-inhabiting fungal communities in temperate forests: molecular evidence from a large scale deadwood decomposition experiment
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158579/
https://www.ncbi.nlm.nih.gov/pubmed/30294306
http://dx.doi.org/10.3389/fmicb.2018.02120
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