Cargando…

Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan

The aim of this study is to explore the effect of genetic variation on diabetic retinopathy (DR) risk in a Taiwanese population. The logistic regression model was used to evaluate the relationship between DR status and risk factors, including the conventional parameters and genetic risk score (GRS)....

Descripción completa

Detalles Bibliográficos
Autores principales: Liao, Wen-Ling, Lin, Jang-Ming, Chen, Wen-Lu, Hsieh, Ming-Chia, Wu, Chia-Ming, Chang, Ya-Wen, Huang, Yu-Chuen, Tsai, Fuu-Jen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6162301/
https://www.ncbi.nlm.nih.gov/pubmed/30266984
http://dx.doi.org/10.1038/s41598-018-32916-y
_version_ 1783359114442702848
author Liao, Wen-Ling
Lin, Jang-Ming
Chen, Wen-Lu
Hsieh, Ming-Chia
Wu, Chia-Ming
Chang, Ya-Wen
Huang, Yu-Chuen
Tsai, Fuu-Jen
author_facet Liao, Wen-Ling
Lin, Jang-Ming
Chen, Wen-Lu
Hsieh, Ming-Chia
Wu, Chia-Ming
Chang, Ya-Wen
Huang, Yu-Chuen
Tsai, Fuu-Jen
author_sort Liao, Wen-Ling
collection PubMed
description The aim of this study is to explore the effect of genetic variation on diabetic retinopathy (DR) risk in a Taiwanese population. The logistic regression model was used to evaluate the relationship between DR status and risk factors, including the conventional parameters and genetic risk score (GRS). Candidate single nucleotide polymorphisms (SNPs) in GRS were selected based on previous reports with a combined P < 10(−4) (genome-wide association) and P < 0.05 (meta-analysis). In total, 58 SNPs in 44 susceptibility loci were selected, and four were used to calculate GRS. After adjustment for age, systolic blood pressure, diabetes duration, and HbA1c, the DR risk was 4.95 times higher for patients in the top GRS third tile than for those in the bottom third tile (95% CI = 2.99–8.18; P < 0.001). The addition of genetic information improved DR prediction, increasing the area under the curve (AUC) from 0.72 to 0.77 (P = 0.0024) and improving the sensitivity of the model such that 40 more subjects were reclassified into DR status. The developed multivariate logistic regression model combining conventional risk factors and the multilocus GRS can predict DR, thus enabling timely treatment to reduce blindness in T2D patients.
format Online
Article
Text
id pubmed-6162301
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-61623012018-10-02 Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan Liao, Wen-Ling Lin, Jang-Ming Chen, Wen-Lu Hsieh, Ming-Chia Wu, Chia-Ming Chang, Ya-Wen Huang, Yu-Chuen Tsai, Fuu-Jen Sci Rep Article The aim of this study is to explore the effect of genetic variation on diabetic retinopathy (DR) risk in a Taiwanese population. The logistic regression model was used to evaluate the relationship between DR status and risk factors, including the conventional parameters and genetic risk score (GRS). Candidate single nucleotide polymorphisms (SNPs) in GRS were selected based on previous reports with a combined P < 10(−4) (genome-wide association) and P < 0.05 (meta-analysis). In total, 58 SNPs in 44 susceptibility loci were selected, and four were used to calculate GRS. After adjustment for age, systolic blood pressure, diabetes duration, and HbA1c, the DR risk was 4.95 times higher for patients in the top GRS third tile than for those in the bottom third tile (95% CI = 2.99–8.18; P < 0.001). The addition of genetic information improved DR prediction, increasing the area under the curve (AUC) from 0.72 to 0.77 (P = 0.0024) and improving the sensitivity of the model such that 40 more subjects were reclassified into DR status. The developed multivariate logistic regression model combining conventional risk factors and the multilocus GRS can predict DR, thus enabling timely treatment to reduce blindness in T2D patients. Nature Publishing Group UK 2018-09-28 /pmc/articles/PMC6162301/ /pubmed/30266984 http://dx.doi.org/10.1038/s41598-018-32916-y Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Liao, Wen-Ling
Lin, Jang-Ming
Chen, Wen-Lu
Hsieh, Ming-Chia
Wu, Chia-Ming
Chang, Ya-Wen
Huang, Yu-Chuen
Tsai, Fuu-Jen
Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title_full Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title_fullStr Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title_full_unstemmed Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title_short Multilocus genetic risk score for diabetic retinopathy in the Han Chinese population of Taiwan
title_sort multilocus genetic risk score for diabetic retinopathy in the han chinese population of taiwan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6162301/
https://www.ncbi.nlm.nih.gov/pubmed/30266984
http://dx.doi.org/10.1038/s41598-018-32916-y
work_keys_str_mv AT liaowenling multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT linjangming multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT chenwenlu multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT hsiehmingchia multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT wuchiaming multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT changyawen multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT huangyuchuen multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan
AT tsaifuujen multilocusgeneticriskscorefordiabeticretinopathyinthehanchinesepopulationoftaiwan