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Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease
Detection of Neisseria meningitidis has become less time- and resource-intensive with a monoplex direct real-time PCR (drt-PCR) to amplify genes from clinical specimens without DNA extraction. To further improve efficiency, we evaluated two triplex drt-PCR assays for the detection of meningococcal s...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6163423/ https://www.ncbi.nlm.nih.gov/pubmed/30200184 http://dx.doi.org/10.3390/diagnostics8030058 |
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author | Whaley, Melissa J. Jenkins, Laurel T. Hu, Fang Chen, Alexander Diarra, Seydou Ouédraogo-Traoré, Rasmata Sacchi, Claudio T. Wang, Xin |
author_facet | Whaley, Melissa J. Jenkins, Laurel T. Hu, Fang Chen, Alexander Diarra, Seydou Ouédraogo-Traoré, Rasmata Sacchi, Claudio T. Wang, Xin |
author_sort | Whaley, Melissa J. |
collection | PubMed |
description | Detection of Neisseria meningitidis has become less time- and resource-intensive with a monoplex direct real-time PCR (drt-PCR) to amplify genes from clinical specimens without DNA extraction. To further improve efficiency, we evaluated two triplex drt-PCR assays for the detection of meningococcal serogroups AWX and BCY. The sensitivity and specificity of the triplex assays were assessed using 228 cerebrospinal fluid (CSF) specimens from meningitis patients and compared to the monoplex for six serogroups. The lower limit of detection range for six serogroup-specific drt-PCR assays was 178–5264 CFU/mL by monoplex and 68–2221 CFU/mL by triplex. The triplex and monoplex showed 100% agreement for six serogroups and the triplex assays achieved similar sensitivity and specificity estimates as the monoplex drt-PCR assays. Our triplex method reduces the time and cost of processing CSF specimens by characterizing six serogroups with only two assays, which is particularly important for testing large numbers of specimens for N. meningitidis surveillance. |
format | Online Article Text |
id | pubmed-6163423 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61634232018-10-11 Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease Whaley, Melissa J. Jenkins, Laurel T. Hu, Fang Chen, Alexander Diarra, Seydou Ouédraogo-Traoré, Rasmata Sacchi, Claudio T. Wang, Xin Diagnostics (Basel) Communication Detection of Neisseria meningitidis has become less time- and resource-intensive with a monoplex direct real-time PCR (drt-PCR) to amplify genes from clinical specimens without DNA extraction. To further improve efficiency, we evaluated two triplex drt-PCR assays for the detection of meningococcal serogroups AWX and BCY. The sensitivity and specificity of the triplex assays were assessed using 228 cerebrospinal fluid (CSF) specimens from meningitis patients and compared to the monoplex for six serogroups. The lower limit of detection range for six serogroup-specific drt-PCR assays was 178–5264 CFU/mL by monoplex and 68–2221 CFU/mL by triplex. The triplex and monoplex showed 100% agreement for six serogroups and the triplex assays achieved similar sensitivity and specificity estimates as the monoplex drt-PCR assays. Our triplex method reduces the time and cost of processing CSF specimens by characterizing six serogroups with only two assays, which is particularly important for testing large numbers of specimens for N. meningitidis surveillance. MDPI 2018-08-30 /pmc/articles/PMC6163423/ /pubmed/30200184 http://dx.doi.org/10.3390/diagnostics8030058 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Whaley, Melissa J. Jenkins, Laurel T. Hu, Fang Chen, Alexander Diarra, Seydou Ouédraogo-Traoré, Rasmata Sacchi, Claudio T. Wang, Xin Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title | Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title_full | Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title_fullStr | Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title_full_unstemmed | Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title_short | Triplex Real-Time PCR without DNA Extraction for the Monitoring of Meningococcal Disease |
title_sort | triplex real-time pcr without dna extraction for the monitoring of meningococcal disease |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6163423/ https://www.ncbi.nlm.nih.gov/pubmed/30200184 http://dx.doi.org/10.3390/diagnostics8030058 |
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