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Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance

Xyloglucan endotransglycosylases/hydrolases (XTHs) are a class of enzymes involved in the construction and remodeling of cellulose/xyloglucan crosslinks and play an important role in regulating cell wall extensibility. However, little is known about this class of enzymes in soybean. Here, 61 soybean...

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Autores principales: Song, Li, Valliyodan, Babu, Prince, Silvas, Wan, Jinrong, Nguyen, Henry T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6164600/
https://www.ncbi.nlm.nih.gov/pubmed/30208612
http://dx.doi.org/10.3390/ijms19092705
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author Song, Li
Valliyodan, Babu
Prince, Silvas
Wan, Jinrong
Nguyen, Henry T.
author_facet Song, Li
Valliyodan, Babu
Prince, Silvas
Wan, Jinrong
Nguyen, Henry T.
author_sort Song, Li
collection PubMed
description Xyloglucan endotransglycosylases/hydrolases (XTHs) are a class of enzymes involved in the construction and remodeling of cellulose/xyloglucan crosslinks and play an important role in regulating cell wall extensibility. However, little is known about this class of enzymes in soybean. Here, 61 soybean XTH genes (GmXTHs) were identified and classified into three subgroups through comparative phylogenetic analysis. Genome duplication greatly contributed to the expansion of GmXTH genes in soybean. A conserved amino acid motif responsible for the catalytic activity was identified in all GmXTHs. Further expression analysis revealed that most GmXTHs exhibited a distinct organ-specific expression pattern, and the expression level of many GmXTH genes was significantly associated with ethylene and flooding stress. To illustrate a possible role of XTH genes in regulating stress responses, the Arabidopsis AtXTH31 gene was overexpressed in soybean. The generated transgenic plants exhibited improved tolerance to flooding stress, with a higher germination rate and longer roots/hypocotyls during the seedling stage and vegetative growth stages. In summary, our combined bioinformatics and gene expression pattern analyses suggest that GmXTH genes play a role in regulating soybean stress responses. The enhanced soybean flooding tolerance resulting from the expression of an Arabidopsis XTH also supports the role of XTH genes in regulating plant flooding stress responses.
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spelling pubmed-61646002018-10-10 Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance Song, Li Valliyodan, Babu Prince, Silvas Wan, Jinrong Nguyen, Henry T. Int J Mol Sci Article Xyloglucan endotransglycosylases/hydrolases (XTHs) are a class of enzymes involved in the construction and remodeling of cellulose/xyloglucan crosslinks and play an important role in regulating cell wall extensibility. However, little is known about this class of enzymes in soybean. Here, 61 soybean XTH genes (GmXTHs) were identified and classified into three subgroups through comparative phylogenetic analysis. Genome duplication greatly contributed to the expansion of GmXTH genes in soybean. A conserved amino acid motif responsible for the catalytic activity was identified in all GmXTHs. Further expression analysis revealed that most GmXTHs exhibited a distinct organ-specific expression pattern, and the expression level of many GmXTH genes was significantly associated with ethylene and flooding stress. To illustrate a possible role of XTH genes in regulating stress responses, the Arabidopsis AtXTH31 gene was overexpressed in soybean. The generated transgenic plants exhibited improved tolerance to flooding stress, with a higher germination rate and longer roots/hypocotyls during the seedling stage and vegetative growth stages. In summary, our combined bioinformatics and gene expression pattern analyses suggest that GmXTH genes play a role in regulating soybean stress responses. The enhanced soybean flooding tolerance resulting from the expression of an Arabidopsis XTH also supports the role of XTH genes in regulating plant flooding stress responses. MDPI 2018-09-11 /pmc/articles/PMC6164600/ /pubmed/30208612 http://dx.doi.org/10.3390/ijms19092705 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Song, Li
Valliyodan, Babu
Prince, Silvas
Wan, Jinrong
Nguyen, Henry T.
Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title_full Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title_fullStr Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title_full_unstemmed Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title_short Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance
title_sort characterization of the xth gene family: new insight to the roles in soybean flooding tolerance
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6164600/
https://www.ncbi.nlm.nih.gov/pubmed/30208612
http://dx.doi.org/10.3390/ijms19092705
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