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Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism

Multidrug resistance (MDR) poses a major challenge to medicine. A principle cause of MDR is through active efflux by MDR transporters situated in the bacterial membrane. Here we present the crystal structure of the major facilitator superfamily (MFS) drug/H(+) antiporter MdfA from Escherichia coli i...

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Autores principales: Nagarathinam, Kumar, Nakada-Nakura, Yoshiko, Parthier, Christoph, Terada, Tohru, Juge, Narinobu, Jaenecke, Frank, Liu, Kehong, Hotta, Yunhon, Miyaji, Takaaki, Omote, Hiroshi, Iwata, So, Nomura, Norimichi, Stubbs, Milton T., Tanabe, Mikio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6167325/
https://www.ncbi.nlm.nih.gov/pubmed/30275448
http://dx.doi.org/10.1038/s41467-018-06306-x
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author Nagarathinam, Kumar
Nakada-Nakura, Yoshiko
Parthier, Christoph
Terada, Tohru
Juge, Narinobu
Jaenecke, Frank
Liu, Kehong
Hotta, Yunhon
Miyaji, Takaaki
Omote, Hiroshi
Iwata, So
Nomura, Norimichi
Stubbs, Milton T.
Tanabe, Mikio
author_facet Nagarathinam, Kumar
Nakada-Nakura, Yoshiko
Parthier, Christoph
Terada, Tohru
Juge, Narinobu
Jaenecke, Frank
Liu, Kehong
Hotta, Yunhon
Miyaji, Takaaki
Omote, Hiroshi
Iwata, So
Nomura, Norimichi
Stubbs, Milton T.
Tanabe, Mikio
author_sort Nagarathinam, Kumar
collection PubMed
description Multidrug resistance (MDR) poses a major challenge to medicine. A principle cause of MDR is through active efflux by MDR transporters situated in the bacterial membrane. Here we present the crystal structure of the major facilitator superfamily (MFS) drug/H(+) antiporter MdfA from Escherichia coli in an outward open conformation. Comparison with the inward facing (drug binding) state shows that, in addition to the expected change in relative orientations of the N- and C-terminal lobes of the antiporter, the conformation of TM5 is kinked and twisted. In vitro reconstitution experiments demonstrate the importance of selected residues for transport and molecular dynamics simulations are used to gain insights into antiporter switching. With the availability of structures of alternative conformational states, we anticipate that MdfA will serve as a model system for understanding drug efflux in MFS MDR antiporters.
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spelling pubmed-61673252018-10-03 Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism Nagarathinam, Kumar Nakada-Nakura, Yoshiko Parthier, Christoph Terada, Tohru Juge, Narinobu Jaenecke, Frank Liu, Kehong Hotta, Yunhon Miyaji, Takaaki Omote, Hiroshi Iwata, So Nomura, Norimichi Stubbs, Milton T. Tanabe, Mikio Nat Commun Article Multidrug resistance (MDR) poses a major challenge to medicine. A principle cause of MDR is through active efflux by MDR transporters situated in the bacterial membrane. Here we present the crystal structure of the major facilitator superfamily (MFS) drug/H(+) antiporter MdfA from Escherichia coli in an outward open conformation. Comparison with the inward facing (drug binding) state shows that, in addition to the expected change in relative orientations of the N- and C-terminal lobes of the antiporter, the conformation of TM5 is kinked and twisted. In vitro reconstitution experiments demonstrate the importance of selected residues for transport and molecular dynamics simulations are used to gain insights into antiporter switching. With the availability of structures of alternative conformational states, we anticipate that MdfA will serve as a model system for understanding drug efflux in MFS MDR antiporters. Nature Publishing Group UK 2018-10-01 /pmc/articles/PMC6167325/ /pubmed/30275448 http://dx.doi.org/10.1038/s41467-018-06306-x Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Nagarathinam, Kumar
Nakada-Nakura, Yoshiko
Parthier, Christoph
Terada, Tohru
Juge, Narinobu
Jaenecke, Frank
Liu, Kehong
Hotta, Yunhon
Miyaji, Takaaki
Omote, Hiroshi
Iwata, So
Nomura, Norimichi
Stubbs, Milton T.
Tanabe, Mikio
Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title_full Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title_fullStr Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title_full_unstemmed Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title_short Outward open conformation of a Major Facilitator Superfamily multidrug/H(+) antiporter provides insights into switching mechanism
title_sort outward open conformation of a major facilitator superfamily multidrug/h(+) antiporter provides insights into switching mechanism
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6167325/
https://www.ncbi.nlm.nih.gov/pubmed/30275448
http://dx.doi.org/10.1038/s41467-018-06306-x
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