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Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus

Kushneria konosiri X49(T) is a member of the Halomonadaceae family within the order Oceanospirillales and can be isolated from salt-fermented larval gizzard shad. The genome of K. konosiri X49(T) reported here provides a genetic basis for its halophilic character. Diverse genes were involved in salt...

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Autores principales: Yun, Ji-Hyun, Sung, Hojun, Kim, Hyun Sik, Tak, Euon Jung, Kang, Woorim, Lee, June-Young, Hyun, Dong-Wook, Kim, Pil Soo, Bae, Jin-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6167781/
https://www.ncbi.nlm.nih.gov/pubmed/30305867
http://dx.doi.org/10.1186/s40793-018-0324-0
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author Yun, Ji-Hyun
Sung, Hojun
Kim, Hyun Sik
Tak, Euon Jung
Kang, Woorim
Lee, June-Young
Hyun, Dong-Wook
Kim, Pil Soo
Bae, Jin-Woo
author_facet Yun, Ji-Hyun
Sung, Hojun
Kim, Hyun Sik
Tak, Euon Jung
Kang, Woorim
Lee, June-Young
Hyun, Dong-Wook
Kim, Pil Soo
Bae, Jin-Woo
author_sort Yun, Ji-Hyun
collection PubMed
description Kushneria konosiri X49(T) is a member of the Halomonadaceae family within the order Oceanospirillales and can be isolated from salt-fermented larval gizzard shad. The genome of K. konosiri X49(T) reported here provides a genetic basis for its halophilic character. Diverse genes were involved in salt-in and -out strategies enabling adaptation of X49(T) to hypersaline environments. Due to resistance to high salt concentrations, genome research of K. konosiri X49(T) will contribute to the improvement of environmental and biotechnological usage by enhancing understanding of the osmotic equilibrium in the cytoplasm. Its genome consists of 3,584,631 bp, with an average G + C content of 59.1%, and 3261 coding sequences, 12 rRNAs, 66 tRNAs, and 8 miscRNAs.
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spelling pubmed-61677812018-10-10 Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus Yun, Ji-Hyun Sung, Hojun Kim, Hyun Sik Tak, Euon Jung Kang, Woorim Lee, June-Young Hyun, Dong-Wook Kim, Pil Soo Bae, Jin-Woo Stand Genomic Sci Short Genome Report Kushneria konosiri X49(T) is a member of the Halomonadaceae family within the order Oceanospirillales and can be isolated from salt-fermented larval gizzard shad. The genome of K. konosiri X49(T) reported here provides a genetic basis for its halophilic character. Diverse genes were involved in salt-in and -out strategies enabling adaptation of X49(T) to hypersaline environments. Due to resistance to high salt concentrations, genome research of K. konosiri X49(T) will contribute to the improvement of environmental and biotechnological usage by enhancing understanding of the osmotic equilibrium in the cytoplasm. Its genome consists of 3,584,631 bp, with an average G + C content of 59.1%, and 3261 coding sequences, 12 rRNAs, 66 tRNAs, and 8 miscRNAs. BioMed Central 2018-10-01 /pmc/articles/PMC6167781/ /pubmed/30305867 http://dx.doi.org/10.1186/s40793-018-0324-0 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Yun, Ji-Hyun
Sung, Hojun
Kim, Hyun Sik
Tak, Euon Jung
Kang, Woorim
Lee, June-Young
Hyun, Dong-Wook
Kim, Pil Soo
Bae, Jin-Woo
Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title_full Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title_fullStr Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title_full_unstemmed Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title_short Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus
title_sort complete genome sequence of the halophile bacterium kushneria konosiri x49(t), isolated from salt-fermented konosirus punctatus
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6167781/
https://www.ncbi.nlm.nih.gov/pubmed/30305867
http://dx.doi.org/10.1186/s40793-018-0324-0
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