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Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6169370/ https://www.ncbi.nlm.nih.gov/pubmed/30294635 http://dx.doi.org/10.1016/j.dib.2018.09.004 |
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author | Cui, Jinglin Li, Jing Lu, Hang Yu, Hong Wei, Dongmei Jiao, Yan Jablonski, Monica M. Gu, Weikuan Chen, Hong |
author_facet | Cui, Jinglin Li, Jing Lu, Hang Yu, Hong Wei, Dongmei Jiao, Yan Jablonski, Monica M. Gu, Weikuan Chen, Hong |
author_sort | Cui, Jinglin |
collection | PubMed |
description | This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:10.1016/j.exer.2018.06.024 (Cui et al., 2018) [1]. Fig. 1 shows the expression quantitative trait loci (eQTL) that regulate the expression level of each gene in the Vegf family. The other three figure show the overlapped genes among the top 500 genes that their expression levels are most closely correlated to each of the Vegf genes. The four tables contain the information of top 50 genes that their expression levels are most closely correlated to each of the Vegf genes, and the correlation of the top 50 genes from one gene to the other genes in the Vegf family. |
format | Online Article Text |
id | pubmed-6169370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-61693702018-10-05 Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family Cui, Jinglin Li, Jing Lu, Hang Yu, Hong Wei, Dongmei Jiao, Yan Jablonski, Monica M. Gu, Weikuan Chen, Hong Data Brief Genetics, Genomics and Molecular Biology This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:10.1016/j.exer.2018.06.024 (Cui et al., 2018) [1]. Fig. 1 shows the expression quantitative trait loci (eQTL) that regulate the expression level of each gene in the Vegf family. The other three figure show the overlapped genes among the top 500 genes that their expression levels are most closely correlated to each of the Vegf genes. The four tables contain the information of top 50 genes that their expression levels are most closely correlated to each of the Vegf genes, and the correlation of the top 50 genes from one gene to the other genes in the Vegf family. Elsevier 2018-09-08 /pmc/articles/PMC6169370/ /pubmed/30294635 http://dx.doi.org/10.1016/j.dib.2018.09.004 Text en http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Cui, Jinglin Li, Jing Lu, Hang Yu, Hong Wei, Dongmei Jiao, Yan Jablonski, Monica M. Gu, Weikuan Chen, Hong Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title | Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title_full | Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title_fullStr | Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title_full_unstemmed | Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title_short | Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family |
title_sort | data sets of eqtl loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of vegf family |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6169370/ https://www.ncbi.nlm.nih.gov/pubmed/30294635 http://dx.doi.org/10.1016/j.dib.2018.09.004 |
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