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Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family

This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:...

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Autores principales: Cui, Jinglin, Li, Jing, Lu, Hang, Yu, Hong, Wei, Dongmei, Jiao, Yan, Jablonski, Monica M., Gu, Weikuan, Chen, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6169370/
https://www.ncbi.nlm.nih.gov/pubmed/30294635
http://dx.doi.org/10.1016/j.dib.2018.09.004
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author Cui, Jinglin
Li, Jing
Lu, Hang
Yu, Hong
Wei, Dongmei
Jiao, Yan
Jablonski, Monica M.
Gu, Weikuan
Chen, Hong
author_facet Cui, Jinglin
Li, Jing
Lu, Hang
Yu, Hong
Wei, Dongmei
Jiao, Yan
Jablonski, Monica M.
Gu, Weikuan
Chen, Hong
author_sort Cui, Jinglin
collection PubMed
description This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:10.1016/j.exer.2018.06.024 (Cui et al., 2018) [1]. Fig. 1 shows the expression quantitative trait loci (eQTL) that regulate the expression level of each gene in the Vegf family. The other three figure show the overlapped genes among the top 500 genes that their expression levels are most closely correlated to each of the Vegf genes. The four tables contain the information of top 50 genes that their expression levels are most closely correlated to each of the Vegf genes, and the correlation of the top 50 genes from one gene to the other genes in the Vegf family.
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spelling pubmed-61693702018-10-05 Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family Cui, Jinglin Li, Jing Lu, Hang Yu, Hong Wei, Dongmei Jiao, Yan Jablonski, Monica M. Gu, Weikuan Chen, Hong Data Brief Genetics, Genomics and Molecular Biology This data is generated from the analysis of similarities and differences in gene expression levels and pathways among genes (VegfA, VegfB, VegfC, and Pgf) in Vegf family using whole genome expression data generated from normal retina of eighty strains of mice. The results have been published in doi:10.1016/j.exer.2018.06.024 (Cui et al., 2018) [1]. Fig. 1 shows the expression quantitative trait loci (eQTL) that regulate the expression level of each gene in the Vegf family. The other three figure show the overlapped genes among the top 500 genes that their expression levels are most closely correlated to each of the Vegf genes. The four tables contain the information of top 50 genes that their expression levels are most closely correlated to each of the Vegf genes, and the correlation of the top 50 genes from one gene to the other genes in the Vegf family. Elsevier 2018-09-08 /pmc/articles/PMC6169370/ /pubmed/30294635 http://dx.doi.org/10.1016/j.dib.2018.09.004 Text en http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Cui, Jinglin
Li, Jing
Lu, Hang
Yu, Hong
Wei, Dongmei
Jiao, Yan
Jablonski, Monica M.
Gu, Weikuan
Chen, Hong
Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title_full Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title_fullStr Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title_full_unstemmed Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title_short Data sets of eQTL loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of Vegf family
title_sort data sets of eqtl loci, correlation analysis, and overlapped genes among gene sets that their expression levels are closely related to genes of vegf family
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6169370/
https://www.ncbi.nlm.nih.gov/pubmed/30294635
http://dx.doi.org/10.1016/j.dib.2018.09.004
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