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MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data

The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provid...

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Autores principales: Niknafs, Yashar S., Pandian, Balaji, Gajjar, Tilak, Gaudette, Zach, Wheelock, Kevin, Maz, Mitra P., Achar, Rohan K., Song, Melinda, Massaro, Cory, Cao, Xuhong, Chinnaiyan, Arul M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Neoplasia Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6171536/
https://www.ncbi.nlm.nih.gov/pubmed/30268942
http://dx.doi.org/10.1016/j.neo.2018.09.001
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author Niknafs, Yashar S.
Pandian, Balaji
Gajjar, Tilak
Gaudette, Zach
Wheelock, Kevin
Maz, Mitra P.
Achar, Rohan K.
Song, Melinda
Massaro, Cory
Cao, Xuhong
Chinnaiyan, Arul M.
author_facet Niknafs, Yashar S.
Pandian, Balaji
Gajjar, Tilak
Gaudette, Zach
Wheelock, Kevin
Maz, Mitra P.
Achar, Rohan K.
Song, Melinda
Massaro, Cory
Cao, Xuhong
Chinnaiyan, Arul M.
author_sort Niknafs, Yashar S.
collection PubMed
description The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provides access to gene expression profiles, enabling users to interrogate expression of genes across myriad normal and cancer tissues and cell lines. From these data, tissue- and cancer-specific expression patterns can be identified. Gene-gene coexpression profiles can also be interrogated. The current portal contains data for over 20,000 RNA-seq samples and will be continually updated.
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spelling pubmed-61715362018-10-10 MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data Niknafs, Yashar S. Pandian, Balaji Gajjar, Tilak Gaudette, Zach Wheelock, Kevin Maz, Mitra P. Achar, Rohan K. Song, Melinda Massaro, Cory Cao, Xuhong Chinnaiyan, Arul M. Neoplasia Short communication The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provides access to gene expression profiles, enabling users to interrogate expression of genes across myriad normal and cancer tissues and cell lines. From these data, tissue- and cancer-specific expression patterns can be identified. Gene-gene coexpression profiles can also be interrogated. The current portal contains data for over 20,000 RNA-seq samples and will be continually updated. Neoplasia Press 2018-09-27 /pmc/articles/PMC6171536/ /pubmed/30268942 http://dx.doi.org/10.1016/j.neo.2018.09.001 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Short communication
Niknafs, Yashar S.
Pandian, Balaji
Gajjar, Tilak
Gaudette, Zach
Wheelock, Kevin
Maz, Mitra P.
Achar, Rohan K.
Song, Melinda
Massaro, Cory
Cao, Xuhong
Chinnaiyan, Arul M.
MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title_full MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title_fullStr MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title_full_unstemmed MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title_short MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
title_sort mipanda: a resource for analyzing and visualizing next-generation sequencing transcriptomics data
topic Short communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6171536/
https://www.ncbi.nlm.nih.gov/pubmed/30268942
http://dx.doi.org/10.1016/j.neo.2018.09.001
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