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MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data
The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provid...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Neoplasia Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6171536/ https://www.ncbi.nlm.nih.gov/pubmed/30268942 http://dx.doi.org/10.1016/j.neo.2018.09.001 |
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author | Niknafs, Yashar S. Pandian, Balaji Gajjar, Tilak Gaudette, Zach Wheelock, Kevin Maz, Mitra P. Achar, Rohan K. Song, Melinda Massaro, Cory Cao, Xuhong Chinnaiyan, Arul M. |
author_facet | Niknafs, Yashar S. Pandian, Balaji Gajjar, Tilak Gaudette, Zach Wheelock, Kevin Maz, Mitra P. Achar, Rohan K. Song, Melinda Massaro, Cory Cao, Xuhong Chinnaiyan, Arul M. |
author_sort | Niknafs, Yashar S. |
collection | PubMed |
description | The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provides access to gene expression profiles, enabling users to interrogate expression of genes across myriad normal and cancer tissues and cell lines. From these data, tissue- and cancer-specific expression patterns can be identified. Gene-gene coexpression profiles can also be interrogated. The current portal contains data for over 20,000 RNA-seq samples and will be continually updated. |
format | Online Article Text |
id | pubmed-6171536 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Neoplasia Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-61715362018-10-10 MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data Niknafs, Yashar S. Pandian, Balaji Gajjar, Tilak Gaudette, Zach Wheelock, Kevin Maz, Mitra P. Achar, Rohan K. Song, Melinda Massaro, Cory Cao, Xuhong Chinnaiyan, Arul M. Neoplasia Short communication The Michigan Portal for the Analysis of NGS data portal (http://mipanda.org) is an open-access online resource that provides the scientific community with access to the results of a large-scale computational analysis of thousands of high-throughput RNA sequencing (RNA-seq) samples. The portal provides access to gene expression profiles, enabling users to interrogate expression of genes across myriad normal and cancer tissues and cell lines. From these data, tissue- and cancer-specific expression patterns can be identified. Gene-gene coexpression profiles can also be interrogated. The current portal contains data for over 20,000 RNA-seq samples and will be continually updated. Neoplasia Press 2018-09-27 /pmc/articles/PMC6171536/ /pubmed/30268942 http://dx.doi.org/10.1016/j.neo.2018.09.001 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Short communication Niknafs, Yashar S. Pandian, Balaji Gajjar, Tilak Gaudette, Zach Wheelock, Kevin Maz, Mitra P. Achar, Rohan K. Song, Melinda Massaro, Cory Cao, Xuhong Chinnaiyan, Arul M. MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title | MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title_full | MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title_fullStr | MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title_full_unstemmed | MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title_short | MiPanda: A Resource for Analyzing and Visualizing Next-Generation Sequencing Transcriptomics Data |
title_sort | mipanda: a resource for analyzing and visualizing next-generation sequencing transcriptomics data |
topic | Short communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6171536/ https://www.ncbi.nlm.nih.gov/pubmed/30268942 http://dx.doi.org/10.1016/j.neo.2018.09.001 |
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