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Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization

In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages...

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Autores principales: Ma, Biao, Yang, Yang, Li, Zhituo, Zhao, Dali, Zhang, Weihui, Jiang, Yanfeng, Xue, Dongbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172368/
https://www.ncbi.nlm.nih.gov/pubmed/30221738
http://dx.doi.org/10.3892/mmr.2018.9486
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author Ma, Biao
Yang, Yang
Li, Zhituo
Zhao, Dali
Zhang, Weihui
Jiang, Yanfeng
Xue, Dongbo
author_facet Ma, Biao
Yang, Yang
Li, Zhituo
Zhao, Dali
Zhang, Weihui
Jiang, Yanfeng
Xue, Dongbo
author_sort Ma, Biao
collection PubMed
description In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages were analyzed using the Gene Expression Omnibus database. Cluster analysis of differentially expressed genes was conducted, and a protein-protein interaction (PPI) network was constructed. Finally, modular analysis and functional enrichment analysis revealed that a Toll-like receptor (TLR) signaling pathway is involved in the regulation of macrophage polarization. Furthermore, the high-degree proteins in the PPI network that are involved in the molecular regulation of macrophage polarization are closely associated with proteins of the TLR signaling pathway. These results suggested that the TLR signaling pathways may be a principal direction of future research on the regulation of macrophage polarization.
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spelling pubmed-61723682018-10-19 Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization Ma, Biao Yang, Yang Li, Zhituo Zhao, Dali Zhang, Weihui Jiang, Yanfeng Xue, Dongbo Mol Med Rep Articles In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages were analyzed using the Gene Expression Omnibus database. Cluster analysis of differentially expressed genes was conducted, and a protein-protein interaction (PPI) network was constructed. Finally, modular analysis and functional enrichment analysis revealed that a Toll-like receptor (TLR) signaling pathway is involved in the regulation of macrophage polarization. Furthermore, the high-degree proteins in the PPI network that are involved in the molecular regulation of macrophage polarization are closely associated with proteins of the TLR signaling pathway. These results suggested that the TLR signaling pathways may be a principal direction of future research on the regulation of macrophage polarization. D.A. Spandidos 2018-11 2018-09-14 /pmc/articles/PMC6172368/ /pubmed/30221738 http://dx.doi.org/10.3892/mmr.2018.9486 Text en Copyright: © Ma et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Ma, Biao
Yang, Yang
Li, Zhituo
Zhao, Dali
Zhang, Weihui
Jiang, Yanfeng
Xue, Dongbo
Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title_full Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title_fullStr Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title_full_unstemmed Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title_short Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
title_sort modular bioinformatics analysis demonstrates that a toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172368/
https://www.ncbi.nlm.nih.gov/pubmed/30221738
http://dx.doi.org/10.3892/mmr.2018.9486
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