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Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization
In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172368/ https://www.ncbi.nlm.nih.gov/pubmed/30221738 http://dx.doi.org/10.3892/mmr.2018.9486 |
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author | Ma, Biao Yang, Yang Li, Zhituo Zhao, Dali Zhang, Weihui Jiang, Yanfeng Xue, Dongbo |
author_facet | Ma, Biao Yang, Yang Li, Zhituo Zhao, Dali Zhang, Weihui Jiang, Yanfeng Xue, Dongbo |
author_sort | Ma, Biao |
collection | PubMed |
description | In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages were analyzed using the Gene Expression Omnibus database. Cluster analysis of differentially expressed genes was conducted, and a protein-protein interaction (PPI) network was constructed. Finally, modular analysis and functional enrichment analysis revealed that a Toll-like receptor (TLR) signaling pathway is involved in the regulation of macrophage polarization. Furthermore, the high-degree proteins in the PPI network that are involved in the molecular regulation of macrophage polarization are closely associated with proteins of the TLR signaling pathway. These results suggested that the TLR signaling pathways may be a principal direction of future research on the regulation of macrophage polarization. |
format | Online Article Text |
id | pubmed-6172368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-61723682018-10-19 Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization Ma, Biao Yang, Yang Li, Zhituo Zhao, Dali Zhang, Weihui Jiang, Yanfeng Xue, Dongbo Mol Med Rep Articles In recent years, an increasing number of studies on the roles of macrophages in tumors, immune responses and metabolism have been published, in which macrophage polarization has been an extensively discussed topic. In the present study, differentially expressed genes in various types of macrophages were analyzed using the Gene Expression Omnibus database. Cluster analysis of differentially expressed genes was conducted, and a protein-protein interaction (PPI) network was constructed. Finally, modular analysis and functional enrichment analysis revealed that a Toll-like receptor (TLR) signaling pathway is involved in the regulation of macrophage polarization. Furthermore, the high-degree proteins in the PPI network that are involved in the molecular regulation of macrophage polarization are closely associated with proteins of the TLR signaling pathway. These results suggested that the TLR signaling pathways may be a principal direction of future research on the regulation of macrophage polarization. D.A. Spandidos 2018-11 2018-09-14 /pmc/articles/PMC6172368/ /pubmed/30221738 http://dx.doi.org/10.3892/mmr.2018.9486 Text en Copyright: © Ma et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Ma, Biao Yang, Yang Li, Zhituo Zhao, Dali Zhang, Weihui Jiang, Yanfeng Xue, Dongbo Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title | Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title_full | Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title_fullStr | Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title_full_unstemmed | Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title_short | Modular bioinformatics analysis demonstrates that a Toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
title_sort | modular bioinformatics analysis demonstrates that a toll-like receptor signaling pathway is involved in the regulation of macrophage polarization |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172368/ https://www.ncbi.nlm.nih.gov/pubmed/30221738 http://dx.doi.org/10.3892/mmr.2018.9486 |
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