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Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation

Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. He...

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Autores principales: Yao, Jingwen, Ruan, Dan, Raymond, Catalina, Liau, Linda M., Salamon, Noriko, Pope, Whitney B., Nghiemphu, Phioanh L., Lai, Albert, Cloughesy, Timothy F., Ellingson, Benjamin M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Grapho Publications, LLC 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173788/
https://www.ncbi.nlm.nih.gov/pubmed/30320212
http://dx.doi.org/10.18383/j.tom.2018.00017
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author Yao, Jingwen
Ruan, Dan
Raymond, Catalina
Liau, Linda M.
Salamon, Noriko
Pope, Whitney B.
Nghiemphu, Phioanh L.
Lai, Albert
Cloughesy, Timothy F.
Ellingson, Benjamin M.
author_facet Yao, Jingwen
Ruan, Dan
Raymond, Catalina
Liau, Linda M.
Salamon, Noriko
Pope, Whitney B.
Nghiemphu, Phioanh L.
Lai, Albert
Cloughesy, Timothy F.
Ellingson, Benjamin M.
author_sort Yao, Jingwen
collection PubMed
description Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. Here we propose 2 new B(0) correction algorithms for use in correcting pH-weighted amine CEST EPI based on k-means clustering and Lorentzian fitting of CEST data: the iterative downsampling estimation using Lorentzian fitting and the 2-stage Lorentzian estimation with 4D polynomial fitting. Higher quality images of asymmetric magnetization transfer ratio (MTR(asym)) at 3.0 ppm could be obtained with the proposed algorithms than with the existing B(0) correction methods. In particular, the proposed methods are shown to improve the intertissue consistency, interpatient consistency, and tumor region signal-to-noise ratio of MTR(asym) at 3.0 ppm images, with nonexcessive computation time.
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spelling pubmed-61737882018-10-12 Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation Yao, Jingwen Ruan, Dan Raymond, Catalina Liau, Linda M. Salamon, Noriko Pope, Whitney B. Nghiemphu, Phioanh L. Lai, Albert Cloughesy, Timothy F. Ellingson, Benjamin M. Tomography Research Articles Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. Here we propose 2 new B(0) correction algorithms for use in correcting pH-weighted amine CEST EPI based on k-means clustering and Lorentzian fitting of CEST data: the iterative downsampling estimation using Lorentzian fitting and the 2-stage Lorentzian estimation with 4D polynomial fitting. Higher quality images of asymmetric magnetization transfer ratio (MTR(asym)) at 3.0 ppm could be obtained with the proposed algorithms than with the existing B(0) correction methods. In particular, the proposed methods are shown to improve the intertissue consistency, interpatient consistency, and tumor region signal-to-noise ratio of MTR(asym) at 3.0 ppm images, with nonexcessive computation time. Grapho Publications, LLC 2018-09 /pmc/articles/PMC6173788/ /pubmed/30320212 http://dx.doi.org/10.18383/j.tom.2018.00017 Text en © 2018 The Authors. Published by Grapho Publications, LLC http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Articles
Yao, Jingwen
Ruan, Dan
Raymond, Catalina
Liau, Linda M.
Salamon, Noriko
Pope, Whitney B.
Nghiemphu, Phioanh L.
Lai, Albert
Cloughesy, Timothy F.
Ellingson, Benjamin M.
Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title_full Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title_fullStr Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title_full_unstemmed Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title_short Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
title_sort improving b(0) correction for ph-weighted amine proton chemical exchange saturation transfer (cest) imaging by use of k-means clustering and lorentzian estimation
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173788/
https://www.ncbi.nlm.nih.gov/pubmed/30320212
http://dx.doi.org/10.18383/j.tom.2018.00017
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