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Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation
Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. He...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Grapho Publications, LLC
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173788/ https://www.ncbi.nlm.nih.gov/pubmed/30320212 http://dx.doi.org/10.18383/j.tom.2018.00017 |
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author | Yao, Jingwen Ruan, Dan Raymond, Catalina Liau, Linda M. Salamon, Noriko Pope, Whitney B. Nghiemphu, Phioanh L. Lai, Albert Cloughesy, Timothy F. Ellingson, Benjamin M. |
author_facet | Yao, Jingwen Ruan, Dan Raymond, Catalina Liau, Linda M. Salamon, Noriko Pope, Whitney B. Nghiemphu, Phioanh L. Lai, Albert Cloughesy, Timothy F. Ellingson, Benjamin M. |
author_sort | Yao, Jingwen |
collection | PubMed |
description | Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. Here we propose 2 new B(0) correction algorithms for use in correcting pH-weighted amine CEST EPI based on k-means clustering and Lorentzian fitting of CEST data: the iterative downsampling estimation using Lorentzian fitting and the 2-stage Lorentzian estimation with 4D polynomial fitting. Higher quality images of asymmetric magnetization transfer ratio (MTR(asym)) at 3.0 ppm could be obtained with the proposed algorithms than with the existing B(0) correction methods. In particular, the proposed methods are shown to improve the intertissue consistency, interpatient consistency, and tumor region signal-to-noise ratio of MTR(asym) at 3.0 ppm images, with nonexcessive computation time. |
format | Online Article Text |
id | pubmed-6173788 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Grapho Publications, LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-61737882018-10-12 Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation Yao, Jingwen Ruan, Dan Raymond, Catalina Liau, Linda M. Salamon, Noriko Pope, Whitney B. Nghiemphu, Phioanh L. Lai, Albert Cloughesy, Timothy F. Ellingson, Benjamin M. Tomography Research Articles Amine chemical exchange saturation transfer (CEST) echoplanar imaging (EPI) provides unique pH and amino acid MRI contrast, enabling sensitive detection of altered microenvironment properties in various diseases. However, CEST contrast is sensitive to static magnetic field (B(0)) inhomogeneities. Here we propose 2 new B(0) correction algorithms for use in correcting pH-weighted amine CEST EPI based on k-means clustering and Lorentzian fitting of CEST data: the iterative downsampling estimation using Lorentzian fitting and the 2-stage Lorentzian estimation with 4D polynomial fitting. Higher quality images of asymmetric magnetization transfer ratio (MTR(asym)) at 3.0 ppm could be obtained with the proposed algorithms than with the existing B(0) correction methods. In particular, the proposed methods are shown to improve the intertissue consistency, interpatient consistency, and tumor region signal-to-noise ratio of MTR(asym) at 3.0 ppm images, with nonexcessive computation time. Grapho Publications, LLC 2018-09 /pmc/articles/PMC6173788/ /pubmed/30320212 http://dx.doi.org/10.18383/j.tom.2018.00017 Text en © 2018 The Authors. Published by Grapho Publications, LLC http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Articles Yao, Jingwen Ruan, Dan Raymond, Catalina Liau, Linda M. Salamon, Noriko Pope, Whitney B. Nghiemphu, Phioanh L. Lai, Albert Cloughesy, Timothy F. Ellingson, Benjamin M. Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title | Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title_full | Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title_fullStr | Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title_full_unstemmed | Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title_short | Improving B(0) Correction for pH-Weighted Amine Proton Chemical Exchange Saturation Transfer (CEST) Imaging by Use of k-Means Clustering and Lorentzian Estimation |
title_sort | improving b(0) correction for ph-weighted amine proton chemical exchange saturation transfer (cest) imaging by use of k-means clustering and lorentzian estimation |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173788/ https://www.ncbi.nlm.nih.gov/pubmed/30320212 http://dx.doi.org/10.18383/j.tom.2018.00017 |
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