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Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences

The formation of chromophore arrays using a DNA templating approach leads to the creation of supramolecular assemblies, where the optical properties of the overall system can be fine‐tuned to a large extent. In particular, porphyrin derivatives have been shown to be versatile building blocks; mostly...

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Autores principales: Ishutkina, Mariia V., Berry, Alice R., Hussain, Rohanah, Khelevina, Olga G., Siligardi, Giuliano, Stulz, Eugen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6174987/
https://www.ncbi.nlm.nih.gov/pubmed/30333712
http://dx.doi.org/10.1002/ejoc.201800683
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author Ishutkina, Mariia V.
Berry, Alice R.
Hussain, Rohanah
Khelevina, Olga G.
Siligardi, Giuliano
Stulz, Eugen
author_facet Ishutkina, Mariia V.
Berry, Alice R.
Hussain, Rohanah
Khelevina, Olga G.
Siligardi, Giuliano
Stulz, Eugen
author_sort Ishutkina, Mariia V.
collection PubMed
description The formation of chromophore arrays using a DNA templating approach leads to the creation of supramolecular assemblies, where the optical properties of the overall system can be fine‐tuned to a large extent. In particular, porphyrin derivatives have been shown to be versatile building blocks; mostly covalent chemistry was used for embedding the units into DNA strands. Self‐assembly of porphyrin modified nucleosides, on the other hand, has not been investigated as a simplified approach. We report on the synthesis of a magnesium(II) tetraaza porphine (MgTAP) coupled to deoxyuridine, and array formation on DNA templates which contain well‐defined oligo(dA) segments showing strong fluorescence enhancement which is significantly larger than that with a Zn‐porphyrin. The use of the deep‐eutectic solvent glycholine is essential for successful assembly formation. The system allows for sizing of short tandem repeat markers with multiple adenosines, thus the concept could be adaptable to in vitro forensic DNA profiling with a suitable set of different chromophores on all nucleosides.
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spelling pubmed-61749872018-10-15 Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences Ishutkina, Mariia V. Berry, Alice R. Hussain, Rohanah Khelevina, Olga G. Siligardi, Giuliano Stulz, Eugen European J Org Chem Communications The formation of chromophore arrays using a DNA templating approach leads to the creation of supramolecular assemblies, where the optical properties of the overall system can be fine‐tuned to a large extent. In particular, porphyrin derivatives have been shown to be versatile building blocks; mostly covalent chemistry was used for embedding the units into DNA strands. Self‐assembly of porphyrin modified nucleosides, on the other hand, has not been investigated as a simplified approach. We report on the synthesis of a magnesium(II) tetraaza porphine (MgTAP) coupled to deoxyuridine, and array formation on DNA templates which contain well‐defined oligo(dA) segments showing strong fluorescence enhancement which is significantly larger than that with a Zn‐porphyrin. The use of the deep‐eutectic solvent glycholine is essential for successful assembly formation. The system allows for sizing of short tandem repeat markers with multiple adenosines, thus the concept could be adaptable to in vitro forensic DNA profiling with a suitable set of different chromophores on all nucleosides. John Wiley and Sons Inc. 2018-07-10 2018-09-30 /pmc/articles/PMC6174987/ /pubmed/30333712 http://dx.doi.org/10.1002/ejoc.201800683 Text en © 2018 The Authors. Published by Wiley‐VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Ishutkina, Mariia V.
Berry, Alice R.
Hussain, Rohanah
Khelevina, Olga G.
Siligardi, Giuliano
Stulz, Eugen
Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title_full Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title_fullStr Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title_full_unstemmed Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title_short Self‐Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences
title_sort self‐assembled porphyrazine nucleosides on dna templates: highly fluorescent chromophore arrays and sizing forensic tandem repeat sequences
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6174987/
https://www.ncbi.nlm.nih.gov/pubmed/30333712
http://dx.doi.org/10.1002/ejoc.201800683
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