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The genetic landscape of 5T models for multiple myeloma
Murine models for multiple myeloma (MM) are often used to investigate pathobiology of multiple myeloma and disease progression. Unlike transgenic mice models, where it is known which oncogene is driving MM disease, the somatic aberrations of spontaneous syngeneic 5T models of MM have not yet been re...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6177465/ https://www.ncbi.nlm.nih.gov/pubmed/30301958 http://dx.doi.org/10.1038/s41598-018-33396-w |
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author | Maes, Ken Boeckx, Bram Vlummens, Philip De Veirman, Kim Menu, Eline Vanderkerken, Karin Lambrechts, Diether De Bruyne, Elke |
author_facet | Maes, Ken Boeckx, Bram Vlummens, Philip De Veirman, Kim Menu, Eline Vanderkerken, Karin Lambrechts, Diether De Bruyne, Elke |
author_sort | Maes, Ken |
collection | PubMed |
description | Murine models for multiple myeloma (MM) are often used to investigate pathobiology of multiple myeloma and disease progression. Unlike transgenic mice models, where it is known which oncogene is driving MM disease, the somatic aberrations of spontaneous syngeneic 5T models of MM have not yet been reported. Here, we analyzed the copy-number alterations (CNA) and mutational landscape of 5T2, 5T33vv and 5TGM1 murine MM models using whole-genome and whole-exome sequencing. Forty four percent of the genome of 5T2 cells is affected by CNAs while this was only 11% and 17% for 5T33vv and 5TGM1 cells, respectively. We found that up to 69% of the genes linked to gain of 1q or deletion of 13q in MM patients are present as respectively gains in 5T2 cells or deletions in 5T33 and 5TGM1 cells. Exome sequencing furthermore revealed mutations of genes involved in RAS/MAPK, PI3K/AKT1 and JAK/STAT signaling, DNA damage response, cell cycle, epigenetic regulation and extracellular matrix organization. We observed a statistically significant overlap of genes mutated in the 5T models and MM patients. Overall, the genetic landscape of the 5T models is heterogeneous with a high number of aberrations involving genes in various multiple myeloma-related pathways. |
format | Online Article Text |
id | pubmed-6177465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61774652018-10-12 The genetic landscape of 5T models for multiple myeloma Maes, Ken Boeckx, Bram Vlummens, Philip De Veirman, Kim Menu, Eline Vanderkerken, Karin Lambrechts, Diether De Bruyne, Elke Sci Rep Article Murine models for multiple myeloma (MM) are often used to investigate pathobiology of multiple myeloma and disease progression. Unlike transgenic mice models, where it is known which oncogene is driving MM disease, the somatic aberrations of spontaneous syngeneic 5T models of MM have not yet been reported. Here, we analyzed the copy-number alterations (CNA) and mutational landscape of 5T2, 5T33vv and 5TGM1 murine MM models using whole-genome and whole-exome sequencing. Forty four percent of the genome of 5T2 cells is affected by CNAs while this was only 11% and 17% for 5T33vv and 5TGM1 cells, respectively. We found that up to 69% of the genes linked to gain of 1q or deletion of 13q in MM patients are present as respectively gains in 5T2 cells or deletions in 5T33 and 5TGM1 cells. Exome sequencing furthermore revealed mutations of genes involved in RAS/MAPK, PI3K/AKT1 and JAK/STAT signaling, DNA damage response, cell cycle, epigenetic regulation and extracellular matrix organization. We observed a statistically significant overlap of genes mutated in the 5T models and MM patients. Overall, the genetic landscape of the 5T models is heterogeneous with a high number of aberrations involving genes in various multiple myeloma-related pathways. Nature Publishing Group UK 2018-10-09 /pmc/articles/PMC6177465/ /pubmed/30301958 http://dx.doi.org/10.1038/s41598-018-33396-w Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Maes, Ken Boeckx, Bram Vlummens, Philip De Veirman, Kim Menu, Eline Vanderkerken, Karin Lambrechts, Diether De Bruyne, Elke The genetic landscape of 5T models for multiple myeloma |
title | The genetic landscape of 5T models for multiple myeloma |
title_full | The genetic landscape of 5T models for multiple myeloma |
title_fullStr | The genetic landscape of 5T models for multiple myeloma |
title_full_unstemmed | The genetic landscape of 5T models for multiple myeloma |
title_short | The genetic landscape of 5T models for multiple myeloma |
title_sort | genetic landscape of 5t models for multiple myeloma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6177465/ https://www.ncbi.nlm.nih.gov/pubmed/30301958 http://dx.doi.org/10.1038/s41598-018-33396-w |
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