Cargando…

Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis

Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy spec...

Descripción completa

Detalles Bibliográficos
Autores principales: Gaston, Sandra M., Grizzle, William E., Rais-Bahrami, Soroush, Kearney, Gary P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6178309/
https://www.ncbi.nlm.nih.gov/pubmed/30363516
http://dx.doi.org/10.21037/tau.2018.09.01
_version_ 1783361941667840000
author Gaston, Sandra M.
Grizzle, William E.
Rais-Bahrami, Soroush
Kearney, Gary P.
author_facet Gaston, Sandra M.
Grizzle, William E.
Rais-Bahrami, Soroush
Kearney, Gary P.
author_sort Gaston, Sandra M.
collection PubMed
description Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response.
format Online
Article
Text
id pubmed-6178309
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher AME Publishing Company
record_format MEDLINE/PubMed
spelling pubmed-61783092018-10-24 Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis Gaston, Sandra M. Grizzle, William E. Rais-Bahrami, Soroush Kearney, Gary P. Transl Androl Urol Technical Note Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response. AME Publishing Company 2018-09 /pmc/articles/PMC6178309/ /pubmed/30363516 http://dx.doi.org/10.21037/tau.2018.09.01 Text en 2018 Translational Andrology and Urology. All rights reserved.
spellingShingle Technical Note
Gaston, Sandra M.
Grizzle, William E.
Rais-Bahrami, Soroush
Kearney, Gary P.
Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title_full Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title_fullStr Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title_full_unstemmed Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title_short Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
title_sort nitrocellulose tissue prints: an innovative approach to preparing high quality dna and rna from prostate biopsies without compromising the cores for pathology diagnosis
topic Technical Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6178309/
https://www.ncbi.nlm.nih.gov/pubmed/30363516
http://dx.doi.org/10.21037/tau.2018.09.01
work_keys_str_mv AT gastonsandram nitrocellulosetissueprintsaninnovativeapproachtopreparinghighqualitydnaandrnafromprostatebiopsieswithoutcompromisingthecoresforpathologydiagnosis
AT grizzlewilliame nitrocellulosetissueprintsaninnovativeapproachtopreparinghighqualitydnaandrnafromprostatebiopsieswithoutcompromisingthecoresforpathologydiagnosis
AT raisbahramisoroush nitrocellulosetissueprintsaninnovativeapproachtopreparinghighqualitydnaandrnafromprostatebiopsieswithoutcompromisingthecoresforpathologydiagnosis
AT kearneygaryp nitrocellulosetissueprintsaninnovativeapproachtopreparinghighqualitydnaandrnafromprostatebiopsieswithoutcompromisingthecoresforpathologydiagnosis