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Visualizing natural history collection data provides insight into collection development and bias
Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6180142/ https://www.ncbi.nlm.nih.gov/pubmed/30319307 http://dx.doi.org/10.3897/BDJ.6.e26741 |
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author | Shirey, Vaughn |
author_facet | Shirey, Vaughn |
author_sort | Shirey, Vaughn |
collection | PubMed |
description | Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted across temporal, taxonomic, and spatial domains. Considering that these biases are the sum of biases across all contributing collections to aggregate datasets, the assessment of bias at the collection level is warranted. Interactive visualization provides a powerful tool for the assessment of these biases and insight into the historical development of natural history collections, providing context for where sources of bias may originate and developing historical narratives to clarify our understanding of our own knowledge about life on Earth. Here, I present a case study on using Sankey diagrams to illustrate the development of the entomology type collection at the Academy of Natural Sciences of Drexel University in Philadelphia, Pennsylvania with the hope that extensions of these practices among individual natural history collections are modified and adopted. |
format | Online Article Text |
id | pubmed-6180142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-61801422018-10-12 Visualizing natural history collection data provides insight into collection development and bias Shirey, Vaughn Biodivers Data J Forum Paper Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted across temporal, taxonomic, and spatial domains. Considering that these biases are the sum of biases across all contributing collections to aggregate datasets, the assessment of bias at the collection level is warranted. Interactive visualization provides a powerful tool for the assessment of these biases and insight into the historical development of natural history collections, providing context for where sources of bias may originate and developing historical narratives to clarify our understanding of our own knowledge about life on Earth. Here, I present a case study on using Sankey diagrams to illustrate the development of the entomology type collection at the Academy of Natural Sciences of Drexel University in Philadelphia, Pennsylvania with the hope that extensions of these practices among individual natural history collections are modified and adopted. Pensoft Publishers 2018-10-03 /pmc/articles/PMC6180142/ /pubmed/30319307 http://dx.doi.org/10.3897/BDJ.6.e26741 Text en Vaughn Shirey http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Forum Paper Shirey, Vaughn Visualizing natural history collection data provides insight into collection development and bias |
title | Visualizing natural history collection data provides insight into collection development and bias |
title_full | Visualizing natural history collection data provides insight into collection development and bias |
title_fullStr | Visualizing natural history collection data provides insight into collection development and bias |
title_full_unstemmed | Visualizing natural history collection data provides insight into collection development and bias |
title_short | Visualizing natural history collection data provides insight into collection development and bias |
title_sort | visualizing natural history collection data provides insight into collection development and bias |
topic | Forum Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6180142/ https://www.ncbi.nlm.nih.gov/pubmed/30319307 http://dx.doi.org/10.3897/BDJ.6.e26741 |
work_keys_str_mv | AT shireyvaughn visualizingnaturalhistorycollectiondataprovidesinsightintocollectiondevelopmentandbias |