Cargando…

Visualizing natural history collection data provides insight into collection development and bias

Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted...

Descripción completa

Detalles Bibliográficos
Autor principal: Shirey, Vaughn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6180142/
https://www.ncbi.nlm.nih.gov/pubmed/30319307
http://dx.doi.org/10.3897/BDJ.6.e26741
_version_ 1783362138225508352
author Shirey, Vaughn
author_facet Shirey, Vaughn
author_sort Shirey, Vaughn
collection PubMed
description Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted across temporal, taxonomic, and spatial domains. Considering that these biases are the sum of biases across all contributing collections to aggregate datasets, the assessment of bias at the collection level is warranted. Interactive visualization provides a powerful tool for the assessment of these biases and insight into the historical development of natural history collections, providing context for where sources of bias may originate and developing historical narratives to clarify our understanding of our own knowledge about life on Earth. Here, I present a case study on using Sankey diagrams to illustrate the development of the entomology type collection at the Academy of Natural Sciences of Drexel University in Philadelphia, Pennsylvania with the hope that extensions of these practices among individual natural history collections are modified and adopted.
format Online
Article
Text
id pubmed-6180142
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Pensoft Publishers
record_format MEDLINE/PubMed
spelling pubmed-61801422018-10-12 Visualizing natural history collection data provides insight into collection development and bias Shirey, Vaughn Biodivers Data J Forum Paper Abstract. Natural history collections contain estimated billions of records representing a large body of knowledge about the diversity and distribution of life on Earth. Assessments of various forms of bias within the aggregated data associated with specimens in these collections have been conducted across temporal, taxonomic, and spatial domains. Considering that these biases are the sum of biases across all contributing collections to aggregate datasets, the assessment of bias at the collection level is warranted. Interactive visualization provides a powerful tool for the assessment of these biases and insight into the historical development of natural history collections, providing context for where sources of bias may originate and developing historical narratives to clarify our understanding of our own knowledge about life on Earth. Here, I present a case study on using Sankey diagrams to illustrate the development of the entomology type collection at the Academy of Natural Sciences of Drexel University in Philadelphia, Pennsylvania with the hope that extensions of these practices among individual natural history collections are modified and adopted. Pensoft Publishers 2018-10-03 /pmc/articles/PMC6180142/ /pubmed/30319307 http://dx.doi.org/10.3897/BDJ.6.e26741 Text en Vaughn Shirey http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Forum Paper
Shirey, Vaughn
Visualizing natural history collection data provides insight into collection development and bias
title Visualizing natural history collection data provides insight into collection development and bias
title_full Visualizing natural history collection data provides insight into collection development and bias
title_fullStr Visualizing natural history collection data provides insight into collection development and bias
title_full_unstemmed Visualizing natural history collection data provides insight into collection development and bias
title_short Visualizing natural history collection data provides insight into collection development and bias
title_sort visualizing natural history collection data provides insight into collection development and bias
topic Forum Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6180142/
https://www.ncbi.nlm.nih.gov/pubmed/30319307
http://dx.doi.org/10.3897/BDJ.6.e26741
work_keys_str_mv AT shireyvaughn visualizingnaturalhistorycollectiondataprovidesinsightintocollectiondevelopmentandbias