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A century of genetic variation inferred from a persistent soil‐stored seed bank

Stratigraphic accretion of dormant propagules in soil can result in natural archives useful for studying ecological and evolutionary responses to environmental change. Few attempts have been made, however, to use soil‐stored seed banks as natural archives, in part because of concerns over nonrandom...

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Autores principales: Summers, Jennifer L., Bernik, Brittany, Saunders, Colin J., McLachlan, Jason S., Blum, Michael J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6183470/
https://www.ncbi.nlm.nih.gov/pubmed/30344638
http://dx.doi.org/10.1111/eva.12675
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author Summers, Jennifer L.
Bernik, Brittany
Saunders, Colin J.
McLachlan, Jason S.
Blum, Michael J.
author_facet Summers, Jennifer L.
Bernik, Brittany
Saunders, Colin J.
McLachlan, Jason S.
Blum, Michael J.
author_sort Summers, Jennifer L.
collection PubMed
description Stratigraphic accretion of dormant propagules in soil can result in natural archives useful for studying ecological and evolutionary responses to environmental change. Few attempts have been made, however, to use soil‐stored seed banks as natural archives, in part because of concerns over nonrandom attrition and mixed stratification. Here, we examine the persistent seed bank of Schoenoplectus americanus, a foundational brackish marsh sedge, to determine whether it can serve as a resource for reconstructing historical records of demographic and population genetic variation. After assembling profiles of the seed bank from radionuclide‐dated soil cores, we germinated seeds to “resurrect” cohorts spanning the 20th century. Using microsatellite markers, we assessed genetic diversity and differentiation among depth cohorts, drawing comparisons to extant plants at the study site and in nearby and more distant marshes. We found that seed density peaked at intermediate soil depths. We also detected genotypic differences among cohorts as well as between cohorts and extant plants. Genetic diversity did not decline with depth, indicating that the observed pattern of differentiation is not due to attrition. Patterns of differentiation within and among extant marshes also suggest that local populations persist as aggregates of small clones, likely reflecting repeated seedling recruitment and low immigration from admixed regional gene pools. These findings indicate that persistent and stratified soil‐stored seed banks merit further consideration as resources for reconstructing decadal‐ to century‐long records that can lend insight into the tempo and nature of ecological and evolutionary processes that shape populations over time.
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spelling pubmed-61834702018-10-19 A century of genetic variation inferred from a persistent soil‐stored seed bank Summers, Jennifer L. Bernik, Brittany Saunders, Colin J. McLachlan, Jason S. Blum, Michael J. Evol Appl Original Articles Stratigraphic accretion of dormant propagules in soil can result in natural archives useful for studying ecological and evolutionary responses to environmental change. Few attempts have been made, however, to use soil‐stored seed banks as natural archives, in part because of concerns over nonrandom attrition and mixed stratification. Here, we examine the persistent seed bank of Schoenoplectus americanus, a foundational brackish marsh sedge, to determine whether it can serve as a resource for reconstructing historical records of demographic and population genetic variation. After assembling profiles of the seed bank from radionuclide‐dated soil cores, we germinated seeds to “resurrect” cohorts spanning the 20th century. Using microsatellite markers, we assessed genetic diversity and differentiation among depth cohorts, drawing comparisons to extant plants at the study site and in nearby and more distant marshes. We found that seed density peaked at intermediate soil depths. We also detected genotypic differences among cohorts as well as between cohorts and extant plants. Genetic diversity did not decline with depth, indicating that the observed pattern of differentiation is not due to attrition. Patterns of differentiation within and among extant marshes also suggest that local populations persist as aggregates of small clones, likely reflecting repeated seedling recruitment and low immigration from admixed regional gene pools. These findings indicate that persistent and stratified soil‐stored seed banks merit further consideration as resources for reconstructing decadal‐ to century‐long records that can lend insight into the tempo and nature of ecological and evolutionary processes that shape populations over time. John Wiley and Sons Inc. 2018-07-29 /pmc/articles/PMC6183470/ /pubmed/30344638 http://dx.doi.org/10.1111/eva.12675 Text en © 2018 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Summers, Jennifer L.
Bernik, Brittany
Saunders, Colin J.
McLachlan, Jason S.
Blum, Michael J.
A century of genetic variation inferred from a persistent soil‐stored seed bank
title A century of genetic variation inferred from a persistent soil‐stored seed bank
title_full A century of genetic variation inferred from a persistent soil‐stored seed bank
title_fullStr A century of genetic variation inferred from a persistent soil‐stored seed bank
title_full_unstemmed A century of genetic variation inferred from a persistent soil‐stored seed bank
title_short A century of genetic variation inferred from a persistent soil‐stored seed bank
title_sort century of genetic variation inferred from a persistent soil‐stored seed bank
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6183470/
https://www.ncbi.nlm.nih.gov/pubmed/30344638
http://dx.doi.org/10.1111/eva.12675
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