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Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera
Heat and drought stress are primary abiotic stresses confining growth of cool-season grass species during summer. The objective of this study was to identify common molecular factors and metabolic pathways associated with heat and drought responses in creeping bentgrass (Agrostis stolonifera) by com...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6185948/ https://www.ncbi.nlm.nih.gov/pubmed/30315246 http://dx.doi.org/10.1038/s41598-018-33597-3 |
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author | Xu, Yi Huang, Bingru |
author_facet | Xu, Yi Huang, Bingru |
author_sort | Xu, Yi |
collection | PubMed |
description | Heat and drought stress are primary abiotic stresses confining growth of cool-season grass species during summer. The objective of this study was to identify common molecular factors and metabolic pathways associated with heat and drought responses in creeping bentgrass (Agrostis stolonifera) by comparative analysis of transcriptomic profiles between plants exposed to heat and drought stress. Plants were exposed to heat stress (35/30 °C day/night temperature) or drought stress by withholding irrigation for 21 d in growth chambers. Transcriptomic profiling by RNA-seq in A. stolonifera (cv. ‘Penncross’) found 670 commonly up-regulated and 812 commonly down-regulated genes by heat and drought stress. Transcriptional up-regulations of differentially expressed genes (DEGs) due to heat and drought stress include genes that were highly enriched in oxylipin biosynthetic process and proline biosynthetic process. Transcriptional down-regulations of genes under heat and drought stress were highly enriched and involved in thiamine metabolic process and calcium sensing receptor. These commonly-regulated genes by heat and drought stress identified in A. stolonifera suggested that drought and heat responses shared such common molecular factors and pathways, which could be potential candidate genes for genetic modification of improving plant tolerance to the combined heat and drought stress. |
format | Online Article Text |
id | pubmed-6185948 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61859482018-10-15 Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera Xu, Yi Huang, Bingru Sci Rep Article Heat and drought stress are primary abiotic stresses confining growth of cool-season grass species during summer. The objective of this study was to identify common molecular factors and metabolic pathways associated with heat and drought responses in creeping bentgrass (Agrostis stolonifera) by comparative analysis of transcriptomic profiles between plants exposed to heat and drought stress. Plants were exposed to heat stress (35/30 °C day/night temperature) or drought stress by withholding irrigation for 21 d in growth chambers. Transcriptomic profiling by RNA-seq in A. stolonifera (cv. ‘Penncross’) found 670 commonly up-regulated and 812 commonly down-regulated genes by heat and drought stress. Transcriptional up-regulations of differentially expressed genes (DEGs) due to heat and drought stress include genes that were highly enriched in oxylipin biosynthetic process and proline biosynthetic process. Transcriptional down-regulations of genes under heat and drought stress were highly enriched and involved in thiamine metabolic process and calcium sensing receptor. These commonly-regulated genes by heat and drought stress identified in A. stolonifera suggested that drought and heat responses shared such common molecular factors and pathways, which could be potential candidate genes for genetic modification of improving plant tolerance to the combined heat and drought stress. Nature Publishing Group UK 2018-10-12 /pmc/articles/PMC6185948/ /pubmed/30315246 http://dx.doi.org/10.1038/s41598-018-33597-3 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Xu, Yi Huang, Bingru Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title | Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title_full | Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title_fullStr | Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title_full_unstemmed | Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title_short | Comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in Agrostis stolonifera |
title_sort | comparative transcriptomic analysis reveals common molecular factors responsive to heat and drought stress in agrostis stolonifera |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6185948/ https://www.ncbi.nlm.nih.gov/pubmed/30315246 http://dx.doi.org/10.1038/s41598-018-33597-3 |
work_keys_str_mv | AT xuyi comparativetranscriptomicanalysisrevealscommonmolecularfactorsresponsivetoheatanddroughtstressinagrostisstolonifera AT huangbingru comparativetranscriptomicanalysisrevealscommonmolecularfactorsresponsivetoheatanddroughtstressinagrostisstolonifera |