Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France

Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude. Here we...

Descripción completa

Detalles Bibliográficos
Autores principales: Faye, Pierre, Bertrand, Claire, Pédron, Jacques, Barny, Marie-Anne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6186074/
https://www.ncbi.nlm.nih.gov/pubmed/30344890
http://dx.doi.org/10.1186/s40793-018-0332-0
_version_ 1783362804101677056
author Faye, Pierre
Bertrand, Claire
Pédron, Jacques
Barny, Marie-Anne
author_facet Faye, Pierre
Bertrand, Claire
Pédron, Jacques
Barny, Marie-Anne
author_sort Faye, Pierre
collection PubMed
description Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude. Here we report the draft genome sequence of two strains belonging to “P. peruviense” isolated from river water in France indicating that the geographic distribution of this specie is likely to be larger than previously anticipated. We compared these genomes with the one published from the “P. peruviense” specie type strain isolated in Peru. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0332-0) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6186074
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-61860742018-10-19 Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France Faye, Pierre Bertrand, Claire Pédron, Jacques Barny, Marie-Anne Stand Genomic Sci Short Genome Report Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude. Here we report the draft genome sequence of two strains belonging to “P. peruviense” isolated from river water in France indicating that the geographic distribution of this specie is likely to be larger than previously anticipated. We compared these genomes with the one published from the “P. peruviense” specie type strain isolated in Peru. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0332-0) contains supplementary material, which is available to authorized users. BioMed Central 2018-10-12 /pmc/articles/PMC6186074/ /pubmed/30344890 http://dx.doi.org/10.1186/s40793-018-0332-0 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Faye, Pierre
Bertrand, Claire
Pédron, Jacques
Barny, Marie-Anne
Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_full Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_fullStr Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_full_unstemmed Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_short Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_sort draft genomes of “pectobacterium peruviense” strains isolated from fresh water in france
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6186074/
https://www.ncbi.nlm.nih.gov/pubmed/30344890
http://dx.doi.org/10.1186/s40793-018-0332-0
work_keys_str_mv AT fayepierre draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT bertrandclaire draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT pedronjacques draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT barnymarieanne draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance

Ejemplares similares