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Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191440/ https://www.ncbi.nlm.nih.gov/pubmed/30327504 http://dx.doi.org/10.1038/s41598-018-33634-1 |
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author | Yang, Hongyi Zhao, Xingyu Liu, Changli Bai, Long Zhao, Min Li, Lili |
author_facet | Yang, Hongyi Zhao, Xingyu Liu, Changli Bai, Long Zhao, Min Li, Lili |
author_sort | Yang, Hongyi |
collection | PubMed |
description | This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus and Meliniomyces dominated EMF communities, followed by Clavaria, Oidiodendron, Lachnum, Acephala, and Phialocephala. There were more dark septate endophytes (DSE) reads from the Greater Khingan Mountains than from other study areas, similar to the results of the percent colonization of DSE by the magnified intersections method. Overall, high-throughput sequencing data provided a rough community-scale sketch of root-associated fungi of V. uliginosum. Two hundred and eighty slow-growing isolates were isolated from root pieces of V. uliginosum, and the isolates matched 16 fungal genera on the basis of morphological and internal transcribed spacer sequence comparison. The isolates of Cryptosporiopsis ericae, Oidiodendron maius, Lachnum sp., Sordariomycetes sp., and Pleosporales sp., formed ericoid hyphal coils via resynthesis trails. The co-existence between EMF and DSE in hair roots was observed via trypan blue staining. A putative model for the co-existence between EMF and DSE in the hair roots of V. uliginosum was proposed. We suggest that under certain environmental stresses, such as low temperature and poor available nutrients, ericoid plants may favor co-colonization by both DSE and EMF. |
format | Online Article Text |
id | pubmed-6191440 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61914402018-10-23 Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum Yang, Hongyi Zhao, Xingyu Liu, Changli Bai, Long Zhao, Min Li, Lili Sci Rep Article This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus and Meliniomyces dominated EMF communities, followed by Clavaria, Oidiodendron, Lachnum, Acephala, and Phialocephala. There were more dark septate endophytes (DSE) reads from the Greater Khingan Mountains than from other study areas, similar to the results of the percent colonization of DSE by the magnified intersections method. Overall, high-throughput sequencing data provided a rough community-scale sketch of root-associated fungi of V. uliginosum. Two hundred and eighty slow-growing isolates were isolated from root pieces of V. uliginosum, and the isolates matched 16 fungal genera on the basis of morphological and internal transcribed spacer sequence comparison. The isolates of Cryptosporiopsis ericae, Oidiodendron maius, Lachnum sp., Sordariomycetes sp., and Pleosporales sp., formed ericoid hyphal coils via resynthesis trails. The co-existence between EMF and DSE in hair roots was observed via trypan blue staining. A putative model for the co-existence between EMF and DSE in the hair roots of V. uliginosum was proposed. We suggest that under certain environmental stresses, such as low temperature and poor available nutrients, ericoid plants may favor co-colonization by both DSE and EMF. Nature Publishing Group UK 2018-10-16 /pmc/articles/PMC6191440/ /pubmed/30327504 http://dx.doi.org/10.1038/s41598-018-33634-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Yang, Hongyi Zhao, Xingyu Liu, Changli Bai, Long Zhao, Min Li, Lili Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title | Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title_full | Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title_fullStr | Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title_full_unstemmed | Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title_short | Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum |
title_sort | diversity and characteristics of colonization of root-associated fungi of vaccinium uliginosum |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191440/ https://www.ncbi.nlm.nih.gov/pubmed/30327504 http://dx.doi.org/10.1038/s41598-018-33634-1 |
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