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Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum

This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus...

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Autores principales: Yang, Hongyi, Zhao, Xingyu, Liu, Changli, Bai, Long, Zhao, Min, Li, Lili
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191440/
https://www.ncbi.nlm.nih.gov/pubmed/30327504
http://dx.doi.org/10.1038/s41598-018-33634-1
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author Yang, Hongyi
Zhao, Xingyu
Liu, Changli
Bai, Long
Zhao, Min
Li, Lili
author_facet Yang, Hongyi
Zhao, Xingyu
Liu, Changli
Bai, Long
Zhao, Min
Li, Lili
author_sort Yang, Hongyi
collection PubMed
description This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus and Meliniomyces dominated EMF communities, followed by Clavaria, Oidiodendron, Lachnum, Acephala, and Phialocephala. There were more dark septate endophytes (DSE) reads from the Greater Khingan Mountains than from other study areas, similar to the results of the percent colonization of DSE by the magnified intersections method. Overall, high-throughput sequencing data provided a rough community-scale sketch of root-associated fungi of V. uliginosum. Two hundred and eighty slow-growing isolates were isolated from root pieces of V. uliginosum, and the isolates matched 16 fungal genera on the basis of morphological and internal transcribed spacer sequence comparison. The isolates of Cryptosporiopsis ericae, Oidiodendron maius, Lachnum sp., Sordariomycetes sp., and Pleosporales sp., formed ericoid hyphal coils via resynthesis trails. The co-existence between EMF and DSE in hair roots was observed via trypan blue staining. A putative model for the co-existence between EMF and DSE in the hair roots of V. uliginosum was proposed. We suggest that under certain environmental stresses, such as low temperature and poor available nutrients, ericoid plants may favor co-colonization by both DSE and EMF.
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spelling pubmed-61914402018-10-23 Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum Yang, Hongyi Zhao, Xingyu Liu, Changli Bai, Long Zhao, Min Li, Lili Sci Rep Article This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus and Meliniomyces dominated EMF communities, followed by Clavaria, Oidiodendron, Lachnum, Acephala, and Phialocephala. There were more dark septate endophytes (DSE) reads from the Greater Khingan Mountains than from other study areas, similar to the results of the percent colonization of DSE by the magnified intersections method. Overall, high-throughput sequencing data provided a rough community-scale sketch of root-associated fungi of V. uliginosum. Two hundred and eighty slow-growing isolates were isolated from root pieces of V. uliginosum, and the isolates matched 16 fungal genera on the basis of morphological and internal transcribed spacer sequence comparison. The isolates of Cryptosporiopsis ericae, Oidiodendron maius, Lachnum sp., Sordariomycetes sp., and Pleosporales sp., formed ericoid hyphal coils via resynthesis trails. The co-existence between EMF and DSE in hair roots was observed via trypan blue staining. A putative model for the co-existence between EMF and DSE in the hair roots of V. uliginosum was proposed. We suggest that under certain environmental stresses, such as low temperature and poor available nutrients, ericoid plants may favor co-colonization by both DSE and EMF. Nature Publishing Group UK 2018-10-16 /pmc/articles/PMC6191440/ /pubmed/30327504 http://dx.doi.org/10.1038/s41598-018-33634-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Yang, Hongyi
Zhao, Xingyu
Liu, Changli
Bai, Long
Zhao, Min
Li, Lili
Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title_full Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title_fullStr Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title_full_unstemmed Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title_short Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
title_sort diversity and characteristics of colonization of root-associated fungi of vaccinium uliginosum
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191440/
https://www.ncbi.nlm.nih.gov/pubmed/30327504
http://dx.doi.org/10.1038/s41598-018-33634-1
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