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Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective

Naturally occurring small molecules include a large variety of natural products from different sources that have confirmed activity against epigenetic targets. In this work we review chemoinformatic, molecular modeling, and other computational approaches that have been used to uncover natural produc...

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Autores principales: Saldívar-González, Fernanda I., Gómez-García, Alejandro, Chávez-Ponce de León, David E., Sánchez-Cruz, Norberto, Ruiz-Rios, Javier, Pilón-Jiménez, B. Angélica, Medina-Franco, José L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191485/
https://www.ncbi.nlm.nih.gov/pubmed/30364171
http://dx.doi.org/10.3389/fphar.2018.01144
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author Saldívar-González, Fernanda I.
Gómez-García, Alejandro
Chávez-Ponce de León, David E.
Sánchez-Cruz, Norberto
Ruiz-Rios, Javier
Pilón-Jiménez, B. Angélica
Medina-Franco, José L.
author_facet Saldívar-González, Fernanda I.
Gómez-García, Alejandro
Chávez-Ponce de León, David E.
Sánchez-Cruz, Norberto
Ruiz-Rios, Javier
Pilón-Jiménez, B. Angélica
Medina-Franco, José L.
author_sort Saldívar-González, Fernanda I.
collection PubMed
description Naturally occurring small molecules include a large variety of natural products from different sources that have confirmed activity against epigenetic targets. In this work we review chemoinformatic, molecular modeling, and other computational approaches that have been used to uncover natural products as inhibitors of DNA methyltransferases, a major family of epigenetic targets with therapeutic interest. Examples of computational approaches surveyed in this work are docking, similarity-based virtual screening, and pharmacophore modeling. It is also discussed the chemoinformatic-guided exploration of the chemical space of naturally occurring compounds as epigenetic modulators which may have significant implications in epigenetic drug discovery and nutriepigenetics.
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spelling pubmed-61914852018-10-24 Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective Saldívar-González, Fernanda I. Gómez-García, Alejandro Chávez-Ponce de León, David E. Sánchez-Cruz, Norberto Ruiz-Rios, Javier Pilón-Jiménez, B. Angélica Medina-Franco, José L. Front Pharmacol Pharmacology Naturally occurring small molecules include a large variety of natural products from different sources that have confirmed activity against epigenetic targets. In this work we review chemoinformatic, molecular modeling, and other computational approaches that have been used to uncover natural products as inhibitors of DNA methyltransferases, a major family of epigenetic targets with therapeutic interest. Examples of computational approaches surveyed in this work are docking, similarity-based virtual screening, and pharmacophore modeling. It is also discussed the chemoinformatic-guided exploration of the chemical space of naturally occurring compounds as epigenetic modulators which may have significant implications in epigenetic drug discovery and nutriepigenetics. Frontiers Media S.A. 2018-10-10 /pmc/articles/PMC6191485/ /pubmed/30364171 http://dx.doi.org/10.3389/fphar.2018.01144 Text en Copyright © 2018 Saldívar-González, Gómez-García, Chávez-Ponce de León, Sánchez-Cruz, Ruiz-Rios, Pilón-Jiménez and Medina-Franco. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Saldívar-González, Fernanda I.
Gómez-García, Alejandro
Chávez-Ponce de León, David E.
Sánchez-Cruz, Norberto
Ruiz-Rios, Javier
Pilón-Jiménez, B. Angélica
Medina-Franco, José L.
Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title_full Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title_fullStr Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title_full_unstemmed Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title_short Inhibitors of DNA Methyltransferases From Natural Sources: A Computational Perspective
title_sort inhibitors of dna methyltransferases from natural sources: a computational perspective
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191485/
https://www.ncbi.nlm.nih.gov/pubmed/30364171
http://dx.doi.org/10.3389/fphar.2018.01144
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