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Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison
Given a set of temporal networks, from different domains and with different sizes, how can we compare them? Can we identify evolutionary patterns that are both (i) characteristic and (ii) meaningful? We address these challenges by introducing a novel temporal and topological network fingerprint name...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6193656/ https://www.ncbi.nlm.nih.gov/pubmed/30335791 http://dx.doi.org/10.1371/journal.pone.0205497 |
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author | Aparício, David Ribeiro, Pedro Silva, Fernando |
author_facet | Aparício, David Ribeiro, Pedro Silva, Fernando |
author_sort | Aparício, David |
collection | PubMed |
description | Given a set of temporal networks, from different domains and with different sizes, how can we compare them? Can we identify evolutionary patterns that are both (i) characteristic and (ii) meaningful? We address these challenges by introducing a novel temporal and topological network fingerprint named Graphlet-orbit Transitions (GoT). We demonstrate that GoT provides very rich and interpretable network characterizations. Our work puts forward an extension of graphlets and uses the notion of orbits to encapsulate the roles of nodes in each subgraph. We build a transition matrix that keeps track of the temporal trajectory of nodes in terms of their orbits, therefore describing their evolution. We also introduce a metric (OTA) to compare two networks when considering these matrices. Our experiments show that networks representing similar systems have characteristic orbit transitions. GoT correctly groups synthetic networks pertaining to well-known graph models more accurately than competing static and dynamic state-of-the-art approaches by over 30%. Furthermore, our tests on real-world networks show that GoT produces highly interpretable results, which we use to provide insight into characteristic orbit transitions. |
format | Online Article Text |
id | pubmed-6193656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-61936562018-11-05 Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison Aparício, David Ribeiro, Pedro Silva, Fernando PLoS One Research Article Given a set of temporal networks, from different domains and with different sizes, how can we compare them? Can we identify evolutionary patterns that are both (i) characteristic and (ii) meaningful? We address these challenges by introducing a novel temporal and topological network fingerprint named Graphlet-orbit Transitions (GoT). We demonstrate that GoT provides very rich and interpretable network characterizations. Our work puts forward an extension of graphlets and uses the notion of orbits to encapsulate the roles of nodes in each subgraph. We build a transition matrix that keeps track of the temporal trajectory of nodes in terms of their orbits, therefore describing their evolution. We also introduce a metric (OTA) to compare two networks when considering these matrices. Our experiments show that networks representing similar systems have characteristic orbit transitions. GoT correctly groups synthetic networks pertaining to well-known graph models more accurately than competing static and dynamic state-of-the-art approaches by over 30%. Furthermore, our tests on real-world networks show that GoT produces highly interpretable results, which we use to provide insight into characteristic orbit transitions. Public Library of Science 2018-10-18 /pmc/articles/PMC6193656/ /pubmed/30335791 http://dx.doi.org/10.1371/journal.pone.0205497 Text en © 2018 Aparício et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Aparício, David Ribeiro, Pedro Silva, Fernando Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title | Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title_full | Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title_fullStr | Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title_full_unstemmed | Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title_short | Graphlet-orbit Transitions (GoT): A fingerprint for temporal network comparison |
title_sort | graphlet-orbit transitions (got): a fingerprint for temporal network comparison |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6193656/ https://www.ncbi.nlm.nih.gov/pubmed/30335791 http://dx.doi.org/10.1371/journal.pone.0205497 |
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