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Subgroup identification in clinical trials via the predicted individual treatment effect

Identifying subgroups of treatment responders through the different phases of clinical trials has the potential to increase success in drug development. Recent developments in subgroup analysis consider subgroups that are defined in terms of the predicted individual treatment effect, i.e. the differ...

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Autores principales: Ballarini, Nicolás M., Rosenkranz, Gerd K., Jaki, Thomas, König, Franz, Posch, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6193713/
https://www.ncbi.nlm.nih.gov/pubmed/30335831
http://dx.doi.org/10.1371/journal.pone.0205971
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author Ballarini, Nicolás M.
Rosenkranz, Gerd K.
Jaki, Thomas
König, Franz
Posch, Martin
author_facet Ballarini, Nicolás M.
Rosenkranz, Gerd K.
Jaki, Thomas
König, Franz
Posch, Martin
author_sort Ballarini, Nicolás M.
collection PubMed
description Identifying subgroups of treatment responders through the different phases of clinical trials has the potential to increase success in drug development. Recent developments in subgroup analysis consider subgroups that are defined in terms of the predicted individual treatment effect, i.e. the difference between the predicted outcome under treatment and the predicted outcome under control for each individual, which in turn may depend on multiple biomarkers. In this work, we study the properties of different modelling strategies to estimate the predicted individual treatment effect. We explore linear models and compare different estimation methods, such as maximum likelihood and the Lasso with and without randomized response. For the latter, we implement confidence intervals based on the selective inference framework to account for the model selection stage. We illustrate the methods in a dataset of a treatment for Alzheimer disease (normal response) and in a dataset of a treatment for prostate cancer (survival outcome). We also evaluate via simulations the performance of using the predicted individual treatment effect to identify subgroups where a novel treatment leads to better outcomes compared to a control treatment.
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spelling pubmed-61937132018-11-05 Subgroup identification in clinical trials via the predicted individual treatment effect Ballarini, Nicolás M. Rosenkranz, Gerd K. Jaki, Thomas König, Franz Posch, Martin PLoS One Research Article Identifying subgroups of treatment responders through the different phases of clinical trials has the potential to increase success in drug development. Recent developments in subgroup analysis consider subgroups that are defined in terms of the predicted individual treatment effect, i.e. the difference between the predicted outcome under treatment and the predicted outcome under control for each individual, which in turn may depend on multiple biomarkers. In this work, we study the properties of different modelling strategies to estimate the predicted individual treatment effect. We explore linear models and compare different estimation methods, such as maximum likelihood and the Lasso with and without randomized response. For the latter, we implement confidence intervals based on the selective inference framework to account for the model selection stage. We illustrate the methods in a dataset of a treatment for Alzheimer disease (normal response) and in a dataset of a treatment for prostate cancer (survival outcome). We also evaluate via simulations the performance of using the predicted individual treatment effect to identify subgroups where a novel treatment leads to better outcomes compared to a control treatment. Public Library of Science 2018-10-18 /pmc/articles/PMC6193713/ /pubmed/30335831 http://dx.doi.org/10.1371/journal.pone.0205971 Text en © 2018 Ballarini et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ballarini, Nicolás M.
Rosenkranz, Gerd K.
Jaki, Thomas
König, Franz
Posch, Martin
Subgroup identification in clinical trials via the predicted individual treatment effect
title Subgroup identification in clinical trials via the predicted individual treatment effect
title_full Subgroup identification in clinical trials via the predicted individual treatment effect
title_fullStr Subgroup identification in clinical trials via the predicted individual treatment effect
title_full_unstemmed Subgroup identification in clinical trials via the predicted individual treatment effect
title_short Subgroup identification in clinical trials via the predicted individual treatment effect
title_sort subgroup identification in clinical trials via the predicted individual treatment effect
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6193713/
https://www.ncbi.nlm.nih.gov/pubmed/30335831
http://dx.doi.org/10.1371/journal.pone.0205971
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