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Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers

Microbial dissimilatory nitrate reduction to nitrite, or nitrate respiration, was detected in association with copepods in the oxygenated water column of the North Atlantic subtropical waters. These unexpected rates correspond to up to 0.09 nmol N copepod(−1) d(−1) and demonstrate a previously unacc...

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Autores principales: Moisander, Pia H., Shoemaker, Katyanne M., Daley, Meaghan C., McCliment, Elizabeth, Larkum, Jennifer, Altabet, Mark A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6194322/
https://www.ncbi.nlm.nih.gov/pubmed/30369912
http://dx.doi.org/10.3389/fmicb.2018.02390
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author Moisander, Pia H.
Shoemaker, Katyanne M.
Daley, Meaghan C.
McCliment, Elizabeth
Larkum, Jennifer
Altabet, Mark A.
author_facet Moisander, Pia H.
Shoemaker, Katyanne M.
Daley, Meaghan C.
McCliment, Elizabeth
Larkum, Jennifer
Altabet, Mark A.
author_sort Moisander, Pia H.
collection PubMed
description Microbial dissimilatory nitrate reduction to nitrite, or nitrate respiration, was detected in association with copepods in the oxygenated water column of the North Atlantic subtropical waters. These unexpected rates correspond to up to 0.09 nmol N copepod(−1) d(−1) and demonstrate a previously unaccounted nitrogen transformation in the oceanic pelagic surface layers. Genes and transcripts for both the periplasmic and membrane associated dissimilatory nitrate reduction pathways (Nap and Nar, respectively) were detected. The napA genes and transcripts were closely related with sequences from several clades of Vibrio sp., while the closest relatives of the narG sequences were Pseudoalteromonas spp. and Alteromonas spp., many of them representing clades only distantly related to previously described cultivated bacteria. The discovered activity demonstrates a novel Gammaproteobacterial respiratory role in copepod association, presumably providing energy for these facultatively anaerobic bacteria, while supporting a reductive path of nitrogen in the oxygenated water column of the open ocean.
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spelling pubmed-61943222018-10-26 Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers Moisander, Pia H. Shoemaker, Katyanne M. Daley, Meaghan C. McCliment, Elizabeth Larkum, Jennifer Altabet, Mark A. Front Microbiol Microbiology Microbial dissimilatory nitrate reduction to nitrite, or nitrate respiration, was detected in association with copepods in the oxygenated water column of the North Atlantic subtropical waters. These unexpected rates correspond to up to 0.09 nmol N copepod(−1) d(−1) and demonstrate a previously unaccounted nitrogen transformation in the oceanic pelagic surface layers. Genes and transcripts for both the periplasmic and membrane associated dissimilatory nitrate reduction pathways (Nap and Nar, respectively) were detected. The napA genes and transcripts were closely related with sequences from several clades of Vibrio sp., while the closest relatives of the narG sequences were Pseudoalteromonas spp. and Alteromonas spp., many of them representing clades only distantly related to previously described cultivated bacteria. The discovered activity demonstrates a novel Gammaproteobacterial respiratory role in copepod association, presumably providing energy for these facultatively anaerobic bacteria, while supporting a reductive path of nitrogen in the oxygenated water column of the open ocean. Frontiers Media S.A. 2018-10-10 /pmc/articles/PMC6194322/ /pubmed/30369912 http://dx.doi.org/10.3389/fmicb.2018.02390 Text en Copyright © 2018 Moisander, Shoemaker, Daley, McCliment, Larkum and Altabet. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Moisander, Pia H.
Shoemaker, Katyanne M.
Daley, Meaghan C.
McCliment, Elizabeth
Larkum, Jennifer
Altabet, Mark A.
Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title_full Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title_fullStr Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title_full_unstemmed Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title_short Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers
title_sort copepod-associated gammaproteobacteria respire nitrate in the open ocean surface layers
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6194322/
https://www.ncbi.nlm.nih.gov/pubmed/30369912
http://dx.doi.org/10.3389/fmicb.2018.02390
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