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Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups

A forensic validation study of the Early Access Huaxia™ Platinum Polymerase Chain Reaction (PCR) kit was completed to document the performance capabilities and limitations. The genotyping of DNA samples was consistent across a large range of template DNA concentrations, with complete profiles obtain...

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Autores principales: Sheng, Xiang, Wang, Yali, Zhang, Jiashuo, Chen, Liqin, Lin, Yuan, Zhao, Zhenmin, Li, Chengtao, Zhang, Suhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197138/
https://www.ncbi.nlm.nih.gov/pubmed/30483662
http://dx.doi.org/10.1080/20961790.2018.1428782
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author Sheng, Xiang
Wang, Yali
Zhang, Jiashuo
Chen, Liqin
Lin, Yuan
Zhao, Zhenmin
Li, Chengtao
Zhang, Suhua
author_facet Sheng, Xiang
Wang, Yali
Zhang, Jiashuo
Chen, Liqin
Lin, Yuan
Zhao, Zhenmin
Li, Chengtao
Zhang, Suhua
author_sort Sheng, Xiang
collection PubMed
description A forensic validation study of the Early Access Huaxia™ Platinum Polymerase Chain Reaction (PCR) kit was completed to document the performance capabilities and limitations. The genotyping of DNA samples was consistent across a large range of template DNA concentrations, with complete profiles obtained at 0.125 ng; however, no more than 2 mm × 1.2 mm punches of samples would be recommended for direct amplification. The size precision and accuracy test revealed the genotyping ability; while consistent results were obtained when comparing the kit with other commercially available systems. In addition, the whole PCR amplification can finish within approximately 45 min, making the system suitable for fast-detection. However, only partial profiles may be obtained with challenging samples, including DNA stored on Foam-Tipped Applicators (FTA) cards or some case samples. For the forensic application in ethnic groups, a total of 282 and 229 alleles were obtained in Han and Mongolia, respectively. Since the 23 short tandem repeats were independent from each other, the cumulative power of exclusion in duos was 0.999 999 157 188 and the cumulative power of exclusion in trios was 0.999 999 999 859 in the Han group while the cumulative power of exclusion in duos (CPE(duo)) was 0.999 998 848 26 and cumulative power of exclusion in trios (CPE(trio)) was 0.999 999 999 79 in the Mongolia group. And good internal consistency was found between the two investigated groups and the Sichuan Han, Hui, Tibetan and Uygur according to available reference data.
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spelling pubmed-61971382018-11-27 Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups Sheng, Xiang Wang, Yali Zhang, Jiashuo Chen, Liqin Lin, Yuan Zhao, Zhenmin Li, Chengtao Zhang, Suhua Forensic Sci Res Original Article A forensic validation study of the Early Access Huaxia™ Platinum Polymerase Chain Reaction (PCR) kit was completed to document the performance capabilities and limitations. The genotyping of DNA samples was consistent across a large range of template DNA concentrations, with complete profiles obtained at 0.125 ng; however, no more than 2 mm × 1.2 mm punches of samples would be recommended for direct amplification. The size precision and accuracy test revealed the genotyping ability; while consistent results were obtained when comparing the kit with other commercially available systems. In addition, the whole PCR amplification can finish within approximately 45 min, making the system suitable for fast-detection. However, only partial profiles may be obtained with challenging samples, including DNA stored on Foam-Tipped Applicators (FTA) cards or some case samples. For the forensic application in ethnic groups, a total of 282 and 229 alleles were obtained in Han and Mongolia, respectively. Since the 23 short tandem repeats were independent from each other, the cumulative power of exclusion in duos was 0.999 999 157 188 and the cumulative power of exclusion in trios was 0.999 999 999 859 in the Han group while the cumulative power of exclusion in duos (CPE(duo)) was 0.999 998 848 26 and cumulative power of exclusion in trios (CPE(trio)) was 0.999 999 999 79 in the Mongolia group. And good internal consistency was found between the two investigated groups and the Sichuan Han, Hui, Tibetan and Uygur according to available reference data. Taylor & Francis 2018-04-02 /pmc/articles/PMC6197138/ /pubmed/30483662 http://dx.doi.org/10.1080/20961790.2018.1428782 Text en © 2018 The Author(s). Published by Taylor & Francis Group on behalf of the Academy of Forensic Science http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Sheng, Xiang
Wang, Yali
Zhang, Jiashuo
Chen, Liqin
Lin, Yuan
Zhao, Zhenmin
Li, Chengtao
Zhang, Suhua
Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title_full Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title_fullStr Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title_full_unstemmed Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title_short Forensic investigation of 23 autosomal STRs and application in Han and Mongolia ethnic groups
title_sort forensic investigation of 23 autosomal strs and application in han and mongolia ethnic groups
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197138/
https://www.ncbi.nlm.nih.gov/pubmed/30483662
http://dx.doi.org/10.1080/20961790.2018.1428782
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