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Simulation of kinematic Kikuchi diffraction patterns from atomistic structures

One of the limitations of atomistic simulations is that many of the computational tools used to extract structural information from atomic trajectories provide metrics that are not directly compatible with experiments for validation. In this work, to bridge between simulation and experiment, a metho...

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Autores principales: Herron, Adam D., Coleman, Shawn P., Dang, Khanh Q., Spearot, Douglas E., Homer, Eric R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197776/
https://www.ncbi.nlm.nih.gov/pubmed/30364675
http://dx.doi.org/10.1016/j.mex.2018.09.001
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author Herron, Adam D.
Coleman, Shawn P.
Dang, Khanh Q.
Spearot, Douglas E.
Homer, Eric R.
author_facet Herron, Adam D.
Coleman, Shawn P.
Dang, Khanh Q.
Spearot, Douglas E.
Homer, Eric R.
author_sort Herron, Adam D.
collection PubMed
description One of the limitations of atomistic simulations is that many of the computational tools used to extract structural information from atomic trajectories provide metrics that are not directly compatible with experiments for validation. In this work, to bridge between simulation and experiment, a method is presented to produce simulated Kikuchi diffraction patterns using data from atomistic simulations, without requiring a priori specification of the crystal structure or defect periodicity. The Kikuchi pattern simulation is based on the kinematic theory of diffraction, with Kikuchi line intensities computed via a discrete structure factor calculation. Reciprocal lattice points are mapped to Kikuchi lines using a geometric projection of the reciprocal space data. This method is validated using single crystal atomistic models, and the novelty of this approach is emphasized by simulating kinematic Kikuchi diffraction patterns from an atomistic model containing a nanoscale dislocation loop. Deviations in kinematic Kikuchi line intensities are explained considering the displacement field of the dislocation loop, as is done in diffraction contrast theory.
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spelling pubmed-61977762018-10-25 Simulation of kinematic Kikuchi diffraction patterns from atomistic structures Herron, Adam D. Coleman, Shawn P. Dang, Khanh Q. Spearot, Douglas E. Homer, Eric R. MethodsX Materials Science One of the limitations of atomistic simulations is that many of the computational tools used to extract structural information from atomic trajectories provide metrics that are not directly compatible with experiments for validation. In this work, to bridge between simulation and experiment, a method is presented to produce simulated Kikuchi diffraction patterns using data from atomistic simulations, without requiring a priori specification of the crystal structure or defect periodicity. The Kikuchi pattern simulation is based on the kinematic theory of diffraction, with Kikuchi line intensities computed via a discrete structure factor calculation. Reciprocal lattice points are mapped to Kikuchi lines using a geometric projection of the reciprocal space data. This method is validated using single crystal atomistic models, and the novelty of this approach is emphasized by simulating kinematic Kikuchi diffraction patterns from an atomistic model containing a nanoscale dislocation loop. Deviations in kinematic Kikuchi line intensities are explained considering the displacement field of the dislocation loop, as is done in diffraction contrast theory. Elsevier 2018-09-06 /pmc/articles/PMC6197776/ /pubmed/30364675 http://dx.doi.org/10.1016/j.mex.2018.09.001 Text en © 2018 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Materials Science
Herron, Adam D.
Coleman, Shawn P.
Dang, Khanh Q.
Spearot, Douglas E.
Homer, Eric R.
Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title_full Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title_fullStr Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title_full_unstemmed Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title_short Simulation of kinematic Kikuchi diffraction patterns from atomistic structures
title_sort simulation of kinematic kikuchi diffraction patterns from atomistic structures
topic Materials Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197776/
https://www.ncbi.nlm.nih.gov/pubmed/30364675
http://dx.doi.org/10.1016/j.mex.2018.09.001
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