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Characterizing Surgical Site Infection Signals in Clinical Notes

Surgical site infections (SSIs) are the most common and costly of hospital acquired infections. An important step in reducing SSIs is accurate SSI detection, which enables measurement and quality improvement, but currently remains expensive through manual chart review. Building off of previous work...

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Autores principales: Skube, Steven J, Hu, Zhen, Arsoniadis, Elliot G, Simon, Gyorgy J, Wick, Elizabeth C, Ko, Clifford Y, Melton, Genevieve B
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197986/
https://www.ncbi.nlm.nih.gov/pubmed/29295241
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author Skube, Steven J
Hu, Zhen
Arsoniadis, Elliot G
Simon, Gyorgy J
Wick, Elizabeth C
Ko, Clifford Y
Melton, Genevieve B
author_facet Skube, Steven J
Hu, Zhen
Arsoniadis, Elliot G
Simon, Gyorgy J
Wick, Elizabeth C
Ko, Clifford Y
Melton, Genevieve B
author_sort Skube, Steven J
collection PubMed
description Surgical site infections (SSIs) are the most common and costly of hospital acquired infections. An important step in reducing SSIs is accurate SSI detection, which enables measurement and quality improvement, but currently remains expensive through manual chart review. Building off of previous work for automated and semi-automated SSI detection using expert-derived “strong features” from clinical notes, we hypothesized that additional SSI phrases may be contained in clinical notes. We systematically characterized phrases and expressions associated with SSIs. While 83% of expert-derived original terms overlapped with new terms and modifiers, an additional 362 modifiers associated with both positive and negative SSI signals were identified and 62 new base observations and actions were identified. Clinical note queries with the most common base terms revealed another 49 modifiers. Clinical notes contain a wide variety of expressions describing infections occurring among surgical specialties which may provide value in improving the performance of SSI detection algorithms.
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spelling pubmed-61979862018-10-22 Characterizing Surgical Site Infection Signals in Clinical Notes Skube, Steven J Hu, Zhen Arsoniadis, Elliot G Simon, Gyorgy J Wick, Elizabeth C Ko, Clifford Y Melton, Genevieve B Stud Health Technol Inform Article Surgical site infections (SSIs) are the most common and costly of hospital acquired infections. An important step in reducing SSIs is accurate SSI detection, which enables measurement and quality improvement, but currently remains expensive through manual chart review. Building off of previous work for automated and semi-automated SSI detection using expert-derived “strong features” from clinical notes, we hypothesized that additional SSI phrases may be contained in clinical notes. We systematically characterized phrases and expressions associated with SSIs. While 83% of expert-derived original terms overlapped with new terms and modifiers, an additional 362 modifiers associated with both positive and negative SSI signals were identified and 62 new base observations and actions were identified. Clinical note queries with the most common base terms revealed another 49 modifiers. Clinical notes contain a wide variety of expressions describing infections occurring among surgical specialties which may provide value in improving the performance of SSI detection algorithms. 2017 /pmc/articles/PMC6197986/ /pubmed/29295241 Text en This article is published online with Open Access by IOS Press and distributed under the terms of the Creative Commons Attribution Non-Commercial License 4.0 (CC BY-NC 4.0). http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Article
Skube, Steven J
Hu, Zhen
Arsoniadis, Elliot G
Simon, Gyorgy J
Wick, Elizabeth C
Ko, Clifford Y
Melton, Genevieve B
Characterizing Surgical Site Infection Signals in Clinical Notes
title Characterizing Surgical Site Infection Signals in Clinical Notes
title_full Characterizing Surgical Site Infection Signals in Clinical Notes
title_fullStr Characterizing Surgical Site Infection Signals in Clinical Notes
title_full_unstemmed Characterizing Surgical Site Infection Signals in Clinical Notes
title_short Characterizing Surgical Site Infection Signals in Clinical Notes
title_sort characterizing surgical site infection signals in clinical notes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197986/
https://www.ncbi.nlm.nih.gov/pubmed/29295241
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