Cargando…

Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection

Here we report data on the draft genome sequence of a tigecycline-resistant Enterobacter cloacae ST93 clinical isolate TREC1 producing KPC-2 carbapenemase from China. The draft genome sequence of E. cloacae TREC1 consisted of 74 contigs that comprised 5,322,835 bp, and the overall GC content of this...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Long, Xu, Juan, He, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6198125/
https://www.ncbi.nlm.nih.gov/pubmed/30364805
http://dx.doi.org/10.1016/j.dib.2018.10.004
_version_ 1783364900988387328
author Sun, Long
Xu, Juan
He, Fang
author_facet Sun, Long
Xu, Juan
He, Fang
author_sort Sun, Long
collection PubMed
description Here we report data on the draft genome sequence of a tigecycline-resistant Enterobacter cloacae ST93 clinical isolate TREC1 producing KPC-2 carbapenemase from China. The draft genome sequence of E. cloacae TREC1 consisted of 74 contigs that comprised 5,322,835 bp, and the overall GC content of this strain amounted to 54.63%. In total, 57 tRNA genes, 5 rRNA operons and 5108 protein-coding sequences were identified in the genome. TREC1 belongs to sequence type ST93. Nineteen antimicrobial resistance genes were confirmed. Antimicrobial susceptibility testing revealed that besides colistin this isolate is resistant to all antibiotics including tigecycline. This Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession number PJZE00000000. (http://www.ncbi.nlm.nih.gov/nuccore/PJZE00000000).
format Online
Article
Text
id pubmed-6198125
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-61981252018-10-25 Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection Sun, Long Xu, Juan He, Fang Data Brief Genetics, Genomics and Molecular Biology Here we report data on the draft genome sequence of a tigecycline-resistant Enterobacter cloacae ST93 clinical isolate TREC1 producing KPC-2 carbapenemase from China. The draft genome sequence of E. cloacae TREC1 consisted of 74 contigs that comprised 5,322,835 bp, and the overall GC content of this strain amounted to 54.63%. In total, 57 tRNA genes, 5 rRNA operons and 5108 protein-coding sequences were identified in the genome. TREC1 belongs to sequence type ST93. Nineteen antimicrobial resistance genes were confirmed. Antimicrobial susceptibility testing revealed that besides colistin this isolate is resistant to all antibiotics including tigecycline. This Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession number PJZE00000000. (http://www.ncbi.nlm.nih.gov/nuccore/PJZE00000000). Elsevier 2018-10-05 /pmc/articles/PMC6198125/ /pubmed/30364805 http://dx.doi.org/10.1016/j.dib.2018.10.004 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Sun, Long
Xu, Juan
He, Fang
Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title_full Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title_fullStr Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title_full_unstemmed Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title_short Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection
title_sort draft genome sequence data of a tigecycline-resistant enterobacter cloacae st93 clinical strain isolated from bloodstream infection
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6198125/
https://www.ncbi.nlm.nih.gov/pubmed/30364805
http://dx.doi.org/10.1016/j.dib.2018.10.004
work_keys_str_mv AT sunlong draftgenomesequencedataofatigecyclineresistantenterobactercloacaest93clinicalstrainisolatedfrombloodstreaminfection
AT xujuan draftgenomesequencedataofatigecyclineresistantenterobactercloacaest93clinicalstrainisolatedfrombloodstreaminfection
AT hefang draftgenomesequencedataofatigecyclineresistantenterobactercloacaest93clinicalstrainisolatedfrombloodstreaminfection