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Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling

BACKGROUND: The measurement of circulating miRNAs has proven to be a powerful bi-omarker tool for several disease processes. Current protocols for the detection of miRNAs usually in-volve an RNA extraction step, requiring a substantial volume of patient serum or plasma to obtain suffi-cient input ma...

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Autores principales: Mariner, Peter D., Korst, Armin, Karimpour-Fard, Anis, Stauffer, Brian L., Miyamoto, Shelley D., Sucharov, Carmen C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Bentham Science Publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6198569/
https://www.ncbi.nlm.nih.gov/pubmed/29658445
http://dx.doi.org/10.2174/2211536607666180416152112
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author Mariner, Peter D.
Korst, Armin
Karimpour-Fard, Anis
Stauffer, Brian L.
Miyamoto, Shelley D.
Sucharov, Carmen C.
author_facet Mariner, Peter D.
Korst, Armin
Karimpour-Fard, Anis
Stauffer, Brian L.
Miyamoto, Shelley D.
Sucharov, Carmen C.
author_sort Mariner, Peter D.
collection PubMed
description BACKGROUND: The measurement of circulating miRNAs has proven to be a powerful bi-omarker tool for several disease processes. Current protocols for the detection of miRNAs usually in-volve an RNA extraction step, requiring a substantial volume of patient serum or plasma to obtain suffi-cient input material. OBJECTIVE: Here, we describe a novel methodology that allows detection of a large number of miRNAs from a small volume of serum or plasma without the need for RNA extraction. METHODS: Three μl of serum or plasma was subjected to three cycles of high and low temperatures (heat/freeze cycles) followed by miRNA arrays. RESULTS: Our results indicate that miRNA detection following this process is highly reproducible when comparing multiple samples from the same subject. Moreover, this protocol increases the reproducibility of miRNA detection in samples that were previously subjected to multiple freeze-thaw cycles. Im-portantly, the detection of miRNAs from serum vs. plasma following heat/freeze cycling are highly comparable, indicating that this heat/freeze process effectively eliminates differences in detection be-tween serum and plasma samples that have been reported using other sample preparation methodologies. CONCLUSION: We propose that this method is a potent alternative to current RNA extraction protocols, substantially reducing the amount of sample necessary for miRNA detection while simultaneously im-proving miRNA detection and reproducibility
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spelling pubmed-61985692018-11-16 Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling Mariner, Peter D. Korst, Armin Karimpour-Fard, Anis Stauffer, Brian L. Miyamoto, Shelley D. Sucharov, Carmen C. Microrna Article BACKGROUND: The measurement of circulating miRNAs has proven to be a powerful bi-omarker tool for several disease processes. Current protocols for the detection of miRNAs usually in-volve an RNA extraction step, requiring a substantial volume of patient serum or plasma to obtain suffi-cient input material. OBJECTIVE: Here, we describe a novel methodology that allows detection of a large number of miRNAs from a small volume of serum or plasma without the need for RNA extraction. METHODS: Three μl of serum or plasma was subjected to three cycles of high and low temperatures (heat/freeze cycles) followed by miRNA arrays. RESULTS: Our results indicate that miRNA detection following this process is highly reproducible when comparing multiple samples from the same subject. Moreover, this protocol increases the reproducibility of miRNA detection in samples that were previously subjected to multiple freeze-thaw cycles. Im-portantly, the detection of miRNAs from serum vs. plasma following heat/freeze cycling are highly comparable, indicating that this heat/freeze process effectively eliminates differences in detection be-tween serum and plasma samples that have been reported using other sample preparation methodologies. CONCLUSION: We propose that this method is a potent alternative to current RNA extraction protocols, substantially reducing the amount of sample necessary for miRNA detection while simultaneously im-proving miRNA detection and reproducibility Bentham Science Publishers 2018-08 2018-08 /pmc/articles/PMC6198569/ /pubmed/29658445 http://dx.doi.org/10.2174/2211536607666180416152112 Text en © 2018 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
spellingShingle Article
Mariner, Peter D.
Korst, Armin
Karimpour-Fard, Anis
Stauffer, Brian L.
Miyamoto, Shelley D.
Sucharov, Carmen C.
Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title_full Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title_fullStr Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title_full_unstemmed Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title_short Improved Detection of Circulating miRNAs in Serum and Plasma Following Rapid Heat/Freeze Cycling
title_sort improved detection of circulating mirnas in serum and plasma following rapid heat/freeze cycling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6198569/
https://www.ncbi.nlm.nih.gov/pubmed/29658445
http://dx.doi.org/10.2174/2211536607666180416152112
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