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Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals

Advanced algorithms are required to reveal the complex relations between neural and behavioral data. In this study, forelimb electromyography (EMG) signals were reconstructed from multi-unit neural signals recorded with multiple electrode arrays (MEAs) from the corticospinal tract (CST) in rats. A s...

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Detalles Bibliográficos
Autores principales: Guo, Yi, Gok, Sinan, Sahin, Mesut
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6199918/
https://www.ncbi.nlm.nih.gov/pubmed/30386200
http://dx.doi.org/10.3389/fnins.2018.00689
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author Guo, Yi
Gok, Sinan
Sahin, Mesut
author_facet Guo, Yi
Gok, Sinan
Sahin, Mesut
author_sort Guo, Yi
collection PubMed
description Advanced algorithms are required to reveal the complex relations between neural and behavioral data. In this study, forelimb electromyography (EMG) signals were reconstructed from multi-unit neural signals recorded with multiple electrode arrays (MEAs) from the corticospinal tract (CST) in rats. A six-layer convolutional neural network (CNN) was compared with linear decoders for predicting the EMG signal. The network contained three session-dependent Rectified Linear Unit (ReLU) feature layers and three Gamma function layers were shared between sessions. Coefficient of determination (R(2)) values over 0.2 and correlations over 0.5 were achieved for reconstruction within individual sessions in multiple animals, even though the forelimb position was unconstrained for most of the behavior duration. The CNN performed visibily better than the linear decoders and model responses outlasted the activation duration of the rat neuromuscular system. These findings suggest that the CNN model implicitly predicted short-term dynamics of skilled forelimb movements from neural signals. These results are encouraging that similar problems in neural signal processing may be solved using variants of CNNs defined with simple analytical functions. Low powered firmware can be developed to house these CNN solutions in real-time applications.
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spelling pubmed-61999182018-11-01 Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals Guo, Yi Gok, Sinan Sahin, Mesut Front Neurosci Neuroscience Advanced algorithms are required to reveal the complex relations between neural and behavioral data. In this study, forelimb electromyography (EMG) signals were reconstructed from multi-unit neural signals recorded with multiple electrode arrays (MEAs) from the corticospinal tract (CST) in rats. A six-layer convolutional neural network (CNN) was compared with linear decoders for predicting the EMG signal. The network contained three session-dependent Rectified Linear Unit (ReLU) feature layers and three Gamma function layers were shared between sessions. Coefficient of determination (R(2)) values over 0.2 and correlations over 0.5 were achieved for reconstruction within individual sessions in multiple animals, even though the forelimb position was unconstrained for most of the behavior duration. The CNN performed visibily better than the linear decoders and model responses outlasted the activation duration of the rat neuromuscular system. These findings suggest that the CNN model implicitly predicted short-term dynamics of skilled forelimb movements from neural signals. These results are encouraging that similar problems in neural signal processing may be solved using variants of CNNs defined with simple analytical functions. Low powered firmware can be developed to house these CNN solutions in real-time applications. Frontiers Media S.A. 2018-10-17 /pmc/articles/PMC6199918/ /pubmed/30386200 http://dx.doi.org/10.3389/fnins.2018.00689 Text en Copyright © 2018 Guo, Gok and Sahin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Guo, Yi
Gok, Sinan
Sahin, Mesut
Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title_full Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title_fullStr Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title_full_unstemmed Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title_short Convolutional Networks Outperform Linear Decoders in Predicting EMG From Spinal Cord Signals
title_sort convolutional networks outperform linear decoders in predicting emg from spinal cord signals
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6199918/
https://www.ncbi.nlm.nih.gov/pubmed/30386200
http://dx.doi.org/10.3389/fnins.2018.00689
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