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Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli

The data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor f...

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Autores principales: Meenakshi, Shanmugaraja, Munavar, M. Hussain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6202797/
https://www.ncbi.nlm.nih.gov/pubmed/30377646
http://dx.doi.org/10.1016/j.dib.2018.10.020
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author Meenakshi, Shanmugaraja
Munavar, M. Hussain
author_facet Meenakshi, Shanmugaraja
Munavar, M. Hussain
author_sort Meenakshi, Shanmugaraja
collection PubMed
description The data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor for over-production of colanic acid capsular polysaccharide (Meenakshi and Munavar, 2015) [1]. The E. coli strains were grown in LB medium at 30 °C overnight in duplicates. Total RNA from each samples were isolated and microarray based transcriptome profiles were studied and compared. The detailed methodology and data are given in this article. The interpretation of these data are discussed in the research article, “Evidence for Up and Down Regulation of 450 genes by rpoB12 (rif) Mutation and their Implications in Complexity of Transcription Modulation in Escherichia coli” (Meenakshi and Munavar, 2018) [2].
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spelling pubmed-62027972018-10-30 Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli Meenakshi, Shanmugaraja Munavar, M. Hussain Data Brief Biochemistry, Genetics and Molecular Biology The data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor for over-production of colanic acid capsular polysaccharide (Meenakshi and Munavar, 2015) [1]. The E. coli strains were grown in LB medium at 30 °C overnight in duplicates. Total RNA from each samples were isolated and microarray based transcriptome profiles were studied and compared. The detailed methodology and data are given in this article. The interpretation of these data are discussed in the research article, “Evidence for Up and Down Regulation of 450 genes by rpoB12 (rif) Mutation and their Implications in Complexity of Transcription Modulation in Escherichia coli” (Meenakshi and Munavar, 2018) [2]. Elsevier 2018-10-09 /pmc/articles/PMC6202797/ /pubmed/30377646 http://dx.doi.org/10.1016/j.dib.2018.10.020 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Meenakshi, Shanmugaraja
Munavar, M. Hussain
Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title_full Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title_fullStr Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title_full_unstemmed Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title_short Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
title_sort microarray based transcriptome profile data of ∆lon and ∆lon rpob12 strains of escherichia coli
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6202797/
https://www.ncbi.nlm.nih.gov/pubmed/30377646
http://dx.doi.org/10.1016/j.dib.2018.10.020
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