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High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)

Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is ab...

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Autores principales: Xia, Xian, Li, Jiahong, Zhou, Zijie, Wang, Dan, Huang, Jing, Wang, Gejiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203287/
https://www.ncbi.nlm.nih.gov/pubmed/30386456
http://dx.doi.org/10.1186/s40793-018-0330-2
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author Xia, Xian
Li, Jiahong
Zhou, Zijie
Wang, Dan
Huang, Jing
Wang, Gejiao
author_facet Xia, Xian
Li, Jiahong
Zhou, Zijie
Wang, Dan
Huang, Jing
Wang, Gejiao
author_sort Xia, Xian
collection PubMed
description Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7(T) shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of P. manganicus JH-7(T) and compare it to related genomes. Strain JH-7(T) has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0330-2) contains supplementary material, which is available to authorized users.
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spelling pubmed-62032872018-11-01 High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) Xia, Xian Li, Jiahong Zhou, Zijie Wang, Dan Huang, Jing Wang, Gejiao Stand Genomic Sci Short Genome Report Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7(T) shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of P. manganicus JH-7(T) and compare it to related genomes. Strain JH-7(T) has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0330-2) contains supplementary material, which is available to authorized users. BioMed Central 2018-10-25 /pmc/articles/PMC6203287/ /pubmed/30386456 http://dx.doi.org/10.1186/s40793-018-0330-2 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Xia, Xian
Li, Jiahong
Zhou, Zijie
Wang, Dan
Huang, Jing
Wang, Gejiao
High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title_full High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title_fullStr High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title_full_unstemmed High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title_short High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
title_sort high-quality-draft genome sequence of the multiple heavy metal resistant bacterium pseudaminobacter manganicus jh-7(t)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203287/
https://www.ncbi.nlm.nih.gov/pubmed/30386456
http://dx.doi.org/10.1186/s40793-018-0330-2
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