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High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T)
Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is ab...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203287/ https://www.ncbi.nlm.nih.gov/pubmed/30386456 http://dx.doi.org/10.1186/s40793-018-0330-2 |
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author | Xia, Xian Li, Jiahong Zhou, Zijie Wang, Dan Huang, Jing Wang, Gejiao |
author_facet | Xia, Xian Li, Jiahong Zhou, Zijie Wang, Dan Huang, Jing Wang, Gejiao |
author_sort | Xia, Xian |
collection | PubMed |
description | Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7(T) shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of P. manganicus JH-7(T) and compare it to related genomes. Strain JH-7(T) has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0330-2) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6203287 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62032872018-11-01 High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) Xia, Xian Li, Jiahong Zhou, Zijie Wang, Dan Huang, Jing Wang, Gejiao Stand Genomic Sci Short Genome Report Pseudaminobacter manganicus JH-7(T) (= KCTC 52258(T) = CCTCC AB 2016107(T)) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7(T) shows multiple heavy metal resistance and can effectively remove Mn(2+) and Cd(2+). In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7(T) shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of P. manganicus JH-7(T) and compare it to related genomes. Strain JH-7(T) has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0330-2) contains supplementary material, which is available to authorized users. BioMed Central 2018-10-25 /pmc/articles/PMC6203287/ /pubmed/30386456 http://dx.doi.org/10.1186/s40793-018-0330-2 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Xia, Xian Li, Jiahong Zhou, Zijie Wang, Dan Huang, Jing Wang, Gejiao High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title | High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title_full | High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title_fullStr | High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title_full_unstemmed | High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title_short | High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7(T) |
title_sort | high-quality-draft genome sequence of the multiple heavy metal resistant bacterium pseudaminobacter manganicus jh-7(t) |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203287/ https://www.ncbi.nlm.nih.gov/pubmed/30386456 http://dx.doi.org/10.1186/s40793-018-0330-2 |
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