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Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses

Morphometric differences were investigated among five fish species of subfamily Barbinae from the Ganga river system through traditional morphometrics and the truss network system. Species taken into account were Puntius chola (Hamilton 1822), Puntius sophore (Hamilton 1822), Pethia ticto (Hamilton...

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Autores principales: Gupta, Deepmala, Dwivedi, Arvind Kumar, Tripathi, Madhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203374/
https://www.ncbi.nlm.nih.gov/pubmed/30365551
http://dx.doi.org/10.1371/journal.pone.0206031
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author Gupta, Deepmala
Dwivedi, Arvind Kumar
Tripathi, Madhu
author_facet Gupta, Deepmala
Dwivedi, Arvind Kumar
Tripathi, Madhu
author_sort Gupta, Deepmala
collection PubMed
description Morphometric differences were investigated among five fish species of subfamily Barbinae from the Ganga river system through traditional morphometrics and the truss network system. Species taken into account were Puntius chola (Hamilton 1822), Puntius sophore (Hamilton 1822), Pethia ticto (Hamilton 1822), Pethia conchonius (Hamilton 1822) and Systomus sarana (Hamilton 1822). Although, taxonomists carefully examine external body features to discriminate these species, there is still a risk of misidentification during a visual assessment. In the present study, the traditional morphological analysis included 22 morphometric measurements and 10 meristic counts. Truss network system of 14 landmarks was interconnected to yield 91 distance variables. The principal component analysis (PCA), discriminant function analysis (DFA) and cluster analysis (CA) were employed in order to determine morphometric variations. In traditional analysis, 29 characters out of 32 were found significant (p<0.05). Eight principal components were extracted through PCA explaining 85.30% of the total variance in samples, DFA correctly classified 100.0% of original grouped cases and 100.0% of cross-validated grouped cases. Truss analysis showed that all the 90 characters were significant (p<0.05). PCA extracted four principal components explaining 96.45% of the total variance. DFA correctly classified 96.1% of original grouped cases and 92.1% of cross-validated grouped cases. The results acquired from the traditional as well as truss analyses indicate significant morphometric heterogeneity. However, variations are not the same for the two different methods (traditional and truss) employed for the analyses. Shape differences among species were evident from relative warps (RW) supporting truss network analysis. Geometric morphometric methods (GMM), but limited use of Procrustes methods revealed even very small dissimilarity between groups. In spite of determining the morphometric differentiation among species, the present study also provides a useful insight on the application and complementary role of truss analysis with traditional morphometric analysis in the correct classification of the selected species.
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spelling pubmed-62033742018-11-19 Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses Gupta, Deepmala Dwivedi, Arvind Kumar Tripathi, Madhu PLoS One Research Article Morphometric differences were investigated among five fish species of subfamily Barbinae from the Ganga river system through traditional morphometrics and the truss network system. Species taken into account were Puntius chola (Hamilton 1822), Puntius sophore (Hamilton 1822), Pethia ticto (Hamilton 1822), Pethia conchonius (Hamilton 1822) and Systomus sarana (Hamilton 1822). Although, taxonomists carefully examine external body features to discriminate these species, there is still a risk of misidentification during a visual assessment. In the present study, the traditional morphological analysis included 22 morphometric measurements and 10 meristic counts. Truss network system of 14 landmarks was interconnected to yield 91 distance variables. The principal component analysis (PCA), discriminant function analysis (DFA) and cluster analysis (CA) were employed in order to determine morphometric variations. In traditional analysis, 29 characters out of 32 were found significant (p<0.05). Eight principal components were extracted through PCA explaining 85.30% of the total variance in samples, DFA correctly classified 100.0% of original grouped cases and 100.0% of cross-validated grouped cases. Truss analysis showed that all the 90 characters were significant (p<0.05). PCA extracted four principal components explaining 96.45% of the total variance. DFA correctly classified 96.1% of original grouped cases and 92.1% of cross-validated grouped cases. The results acquired from the traditional as well as truss analyses indicate significant morphometric heterogeneity. However, variations are not the same for the two different methods (traditional and truss) employed for the analyses. Shape differences among species were evident from relative warps (RW) supporting truss network analysis. Geometric morphometric methods (GMM), but limited use of Procrustes methods revealed even very small dissimilarity between groups. In spite of determining the morphometric differentiation among species, the present study also provides a useful insight on the application and complementary role of truss analysis with traditional morphometric analysis in the correct classification of the selected species. Public Library of Science 2018-10-26 /pmc/articles/PMC6203374/ /pubmed/30365551 http://dx.doi.org/10.1371/journal.pone.0206031 Text en © 2018 Gupta et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Gupta, Deepmala
Dwivedi, Arvind Kumar
Tripathi, Madhu
Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title_full Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title_fullStr Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title_full_unstemmed Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title_short Taxonomic validation of five fish species of subfamily Barbinae from the Ganga river system of northern India using traditional and truss analyses
title_sort taxonomic validation of five fish species of subfamily barbinae from the ganga river system of northern india using traditional and truss analyses
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203374/
https://www.ncbi.nlm.nih.gov/pubmed/30365551
http://dx.doi.org/10.1371/journal.pone.0206031
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