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The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study

Colorectal cancer (CRC) risk prediction models could be used to risk-stratify the population to provide individually tailored screening provision. Using participants from the UK Biobank prospective cohort study, we evaluated whether the addition of a genetic risk score (GRS) could improve the perfor...

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Autores principales: Smith, Todd, Gunter, Marc J., Tzoulaki, Ioanna, Muller, David C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203780/
https://www.ncbi.nlm.nih.gov/pubmed/30323197
http://dx.doi.org/10.1038/s41416-018-0282-8
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author Smith, Todd
Gunter, Marc J.
Tzoulaki, Ioanna
Muller, David C.
author_facet Smith, Todd
Gunter, Marc J.
Tzoulaki, Ioanna
Muller, David C.
author_sort Smith, Todd
collection PubMed
description Colorectal cancer (CRC) risk prediction models could be used to risk-stratify the population to provide individually tailored screening provision. Using participants from the UK Biobank prospective cohort study, we evaluated whether the addition of a genetic risk score (GRS) could improve the performance of two previously validated models. Inclusion of the GRS did not appreciably improve discrimination of either model, and led to substantial miscalibration. Following recalibration the discrimination did not change, but good calibration for models incorporating the GRS was recovered. Comparing predictions between models with and without the GRS, 5% of participants or fewer changed their absolute risk by ±0.3% or more in either model. In summary, addition of a GRS did not meaningfully improve the performance of validated CRC-risk prediction models. At present, provision of genetic information is not useful for risk stratification for CRC.
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spelling pubmed-62037802019-06-25 The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study Smith, Todd Gunter, Marc J. Tzoulaki, Ioanna Muller, David C. Br J Cancer Brief Communication Colorectal cancer (CRC) risk prediction models could be used to risk-stratify the population to provide individually tailored screening provision. Using participants from the UK Biobank prospective cohort study, we evaluated whether the addition of a genetic risk score (GRS) could improve the performance of two previously validated models. Inclusion of the GRS did not appreciably improve discrimination of either model, and led to substantial miscalibration. Following recalibration the discrimination did not change, but good calibration for models incorporating the GRS was recovered. Comparing predictions between models with and without the GRS, 5% of participants or fewer changed their absolute risk by ±0.3% or more in either model. In summary, addition of a GRS did not meaningfully improve the performance of validated CRC-risk prediction models. At present, provision of genetic information is not useful for risk stratification for CRC. Nature Publishing Group UK 2018-10-16 2018-10-16 /pmc/articles/PMC6203780/ /pubmed/30323197 http://dx.doi.org/10.1038/s41416-018-0282-8 Text en © The Author(s) 2018 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Brief Communication
Smith, Todd
Gunter, Marc J.
Tzoulaki, Ioanna
Muller, David C.
The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title_full The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title_fullStr The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title_full_unstemmed The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title_short The added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the UK Biobank prospective cohort study
title_sort added value of genetic information in colorectal cancer risk prediction models: development and evaluation in the uk biobank prospective cohort study
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203780/
https://www.ncbi.nlm.nih.gov/pubmed/30323197
http://dx.doi.org/10.1038/s41416-018-0282-8
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