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A Case of Need: Linking Traits to Genebank Accessions

Genebanks are responsible for collecting, maintaining, characterizing, documenting, and distributing plant genetic resources for research, education, and breeding purposes. The rationale for requests of plant materials varies highly from areas of anthropology, social science, small-holder farmers, t...

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Autores principales: Anglin, Noelle L., Amri, Ahmed, Kehel, Zakaria, Ellis, Dave
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc., publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6204556/
https://www.ncbi.nlm.nih.gov/pubmed/30325668
http://dx.doi.org/10.1089/bio.2018.0033
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author Anglin, Noelle L.
Amri, Ahmed
Kehel, Zakaria
Ellis, Dave
author_facet Anglin, Noelle L.
Amri, Ahmed
Kehel, Zakaria
Ellis, Dave
author_sort Anglin, Noelle L.
collection PubMed
description Genebanks are responsible for collecting, maintaining, characterizing, documenting, and distributing plant genetic resources for research, education, and breeding purposes. The rationale for requests of plant materials varies highly from areas of anthropology, social science, small-holder farmers, the commercial sector, rehabilitation of degraded systems, all the way to crop improvement and basic research. Matching “the right” accessions to a particular request is not always a straightforward process especially when genetic resource collections are large and the user does not already know which accession or even which species they want to study. Some requestors have limited knowledge of the crop; therefore, they do not know where to begin and thus, initiate the search by consultation with crop curators to help direct their request to the most suitable germplasm. One way to enhance the use of genebank material and aid in the selection of genetic resources is to have thoroughly cataloged agronomic, biochemical, genomic, and other traits linked to genebank accessions. In general, traits of importance to most users include genotypes that thrive under various biotic and abiotic stresses, morphological traits (color, shape, size of fruits), plant architecture, disease resistance, nutrient content, yield, and crop specific quality traits. In this review, we discuss methods for linking traits to genebank accessions, examples of linked traits, and some of the complexities involved, while reinforcing why it is critical to have well characterized accessions with clear trait data publicly available.
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spelling pubmed-62045562018-10-29 A Case of Need: Linking Traits to Genebank Accessions Anglin, Noelle L. Amri, Ahmed Kehel, Zakaria Ellis, Dave Biopreserv Biobank Original Articles Genebanks are responsible for collecting, maintaining, characterizing, documenting, and distributing plant genetic resources for research, education, and breeding purposes. The rationale for requests of plant materials varies highly from areas of anthropology, social science, small-holder farmers, the commercial sector, rehabilitation of degraded systems, all the way to crop improvement and basic research. Matching “the right” accessions to a particular request is not always a straightforward process especially when genetic resource collections are large and the user does not already know which accession or even which species they want to study. Some requestors have limited knowledge of the crop; therefore, they do not know where to begin and thus, initiate the search by consultation with crop curators to help direct their request to the most suitable germplasm. One way to enhance the use of genebank material and aid in the selection of genetic resources is to have thoroughly cataloged agronomic, biochemical, genomic, and other traits linked to genebank accessions. In general, traits of importance to most users include genotypes that thrive under various biotic and abiotic stresses, morphological traits (color, shape, size of fruits), plant architecture, disease resistance, nutrient content, yield, and crop specific quality traits. In this review, we discuss methods for linking traits to genebank accessions, examples of linked traits, and some of the complexities involved, while reinforcing why it is critical to have well characterized accessions with clear trait data publicly available. Mary Ann Liebert, Inc., publishers 2018-10-01 2018-10-12 /pmc/articles/PMC6204556/ /pubmed/30325668 http://dx.doi.org/10.1089/bio.2018.0033 Text en © Noelle L. Anglin, et al., 2018; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Anglin, Noelle L.
Amri, Ahmed
Kehel, Zakaria
Ellis, Dave
A Case of Need: Linking Traits to Genebank Accessions
title A Case of Need: Linking Traits to Genebank Accessions
title_full A Case of Need: Linking Traits to Genebank Accessions
title_fullStr A Case of Need: Linking Traits to Genebank Accessions
title_full_unstemmed A Case of Need: Linking Traits to Genebank Accessions
title_short A Case of Need: Linking Traits to Genebank Accessions
title_sort case of need: linking traits to genebank accessions
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6204556/
https://www.ncbi.nlm.nih.gov/pubmed/30325668
http://dx.doi.org/10.1089/bio.2018.0033
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