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Simplified procedure for efficient and unbiased population size estimation
Population size estimation is relevant to social and ecological sciences. Exhaustive manual counting, the density method and automated computer vision are some of the estimation methods that are currently used. Some of these methods may work in concrete cases but they do not provide a fast, efficien...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6205639/ https://www.ncbi.nlm.nih.gov/pubmed/30372479 http://dx.doi.org/10.1371/journal.pone.0206091 |
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author | Cruz, Marcos González-Villa, Javier |
author_facet | Cruz, Marcos González-Villa, Javier |
author_sort | Cruz, Marcos |
collection | PubMed |
description | Population size estimation is relevant to social and ecological sciences. Exhaustive manual counting, the density method and automated computer vision are some of the estimation methods that are currently used. Some of these methods may work in concrete cases but they do not provide a fast, efficient and unbiased estimation in general. Recently, the CountEm method, based on systematic sampling with a grid of quadrats, was proposed. It offers an unbiased estimation that can be applied to any population. However, choosing suitable grid parameters is sometimes cumbersome. Here we define a more intuitive grid parametrization, using initial number of quadrats and sampling fraction. A crowd counting dataset with 51 images and their corresponding, manually annotated position point patterns, are used to analyze the variation of the coefficient of error with respect to different parameter choices. Our Monte Carlo resampling results show that the error depends on the sample size and the number of nonempty quadrats, but not on the size of the target population. A procedure to choose suitable parameter values is described, and the expected coefficients of error are given. Counting about 100 particles in 30 nonempty quadrats usually yields coefficients of error below 10%. |
format | Online Article Text |
id | pubmed-6205639 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62056392018-11-19 Simplified procedure for efficient and unbiased population size estimation Cruz, Marcos González-Villa, Javier PLoS One Research Article Population size estimation is relevant to social and ecological sciences. Exhaustive manual counting, the density method and automated computer vision are some of the estimation methods that are currently used. Some of these methods may work in concrete cases but they do not provide a fast, efficient and unbiased estimation in general. Recently, the CountEm method, based on systematic sampling with a grid of quadrats, was proposed. It offers an unbiased estimation that can be applied to any population. However, choosing suitable grid parameters is sometimes cumbersome. Here we define a more intuitive grid parametrization, using initial number of quadrats and sampling fraction. A crowd counting dataset with 51 images and their corresponding, manually annotated position point patterns, are used to analyze the variation of the coefficient of error with respect to different parameter choices. Our Monte Carlo resampling results show that the error depends on the sample size and the number of nonempty quadrats, but not on the size of the target population. A procedure to choose suitable parameter values is described, and the expected coefficients of error are given. Counting about 100 particles in 30 nonempty quadrats usually yields coefficients of error below 10%. Public Library of Science 2018-10-29 /pmc/articles/PMC6205639/ /pubmed/30372479 http://dx.doi.org/10.1371/journal.pone.0206091 Text en © 2018 Cruz, González-Villa http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cruz, Marcos González-Villa, Javier Simplified procedure for efficient and unbiased population size estimation |
title | Simplified procedure for efficient and unbiased population size estimation |
title_full | Simplified procedure for efficient and unbiased population size estimation |
title_fullStr | Simplified procedure for efficient and unbiased population size estimation |
title_full_unstemmed | Simplified procedure for efficient and unbiased population size estimation |
title_short | Simplified procedure for efficient and unbiased population size estimation |
title_sort | simplified procedure for efficient and unbiased population size estimation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6205639/ https://www.ncbi.nlm.nih.gov/pubmed/30372479 http://dx.doi.org/10.1371/journal.pone.0206091 |
work_keys_str_mv | AT cruzmarcos simplifiedprocedureforefficientandunbiasedpopulationsizeestimation AT gonzalezvillajavier simplifiedprocedureforefficientandunbiasedpopulationsizeestimation |