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Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.)
BACKGROUND: An efficient transformation protocol is a primary requisite to study and utilize the genetic potential of any plant species. A quick transformation system is also crucial for the functional analysis of genes along with the study of proteins and their interactions in vivo. Presently, howe...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6205801/ https://www.ncbi.nlm.nih.gov/pubmed/30386413 http://dx.doi.org/10.1186/s13007-018-0365-9 |
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author | Priyadarshani, S. V. G. N. Hu, Bingyan Li, Weimin Ali, Hina Jia, Haifeng Zhao, Lihua Ojolo, Simon Peter Azam, Syed Muhammad Xiong, Junjie Yan, Moakai ur Rahman, Zia Wu, Qingsong Qin, Yuan |
author_facet | Priyadarshani, S. V. G. N. Hu, Bingyan Li, Weimin Ali, Hina Jia, Haifeng Zhao, Lihua Ojolo, Simon Peter Azam, Syed Muhammad Xiong, Junjie Yan, Moakai ur Rahman, Zia Wu, Qingsong Qin, Yuan |
author_sort | Priyadarshani, S. V. G. N. |
collection | PubMed |
description | BACKGROUND: An efficient transformation protocol is a primary requisite to study and utilize the genetic potential of any plant species. A quick transformation system is also crucial for the functional analysis of genes along with the study of proteins and their interactions in vivo. Presently, however, quick and effective transformation systems are still lacking for many plant species including pineapple. This has limited the full exploration of the genetic repository of pineapple as well as the study of its genes, protein localization and protein interactions. RESULTS: To address the above limitations, we have developed an efficient system for protoplast isolation and subcellular localization of desired proteins using pineapple plants derived from tissue culture. A cocktail of 1.5% (W/V) Cellulase R-10 and 0.5% (W/V) Macerozyme R-10 resulted in 51% viable protoplasts with 3 h digestion. Compared to previously reported protocols, our protoplast isolation method is markedly faster (saving 4.5 h), requires only a small quantity of tissue sample (1 g of leaves) and has high yield (6.5 × 10(5)). The quality of the isolated protoplasts was verified using organelle localization in protoplasts with different organelle markers. Additionally, colocalization analysis of two pineapple Mg(2+) transporter genes in pineapple protoplasts was consistent with the results in a tobacco transient expression system, confirming that the protoplast isolation method can be used to study subcellular localization. Further findings showed that the system is also suitable for protein–protein interaction studies. CONCLUSION: Based on our findings, the presently described method is an efficient and effective strategy for pineapple protoplast isolation and transformation; it is convenient and time saving and provides a greater platform for transformation studies. |
format | Online Article Text |
id | pubmed-6205801 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62058012018-10-31 Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) Priyadarshani, S. V. G. N. Hu, Bingyan Li, Weimin Ali, Hina Jia, Haifeng Zhao, Lihua Ojolo, Simon Peter Azam, Syed Muhammad Xiong, Junjie Yan, Moakai ur Rahman, Zia Wu, Qingsong Qin, Yuan Plant Methods Research BACKGROUND: An efficient transformation protocol is a primary requisite to study and utilize the genetic potential of any plant species. A quick transformation system is also crucial for the functional analysis of genes along with the study of proteins and their interactions in vivo. Presently, however, quick and effective transformation systems are still lacking for many plant species including pineapple. This has limited the full exploration of the genetic repository of pineapple as well as the study of its genes, protein localization and protein interactions. RESULTS: To address the above limitations, we have developed an efficient system for protoplast isolation and subcellular localization of desired proteins using pineapple plants derived from tissue culture. A cocktail of 1.5% (W/V) Cellulase R-10 and 0.5% (W/V) Macerozyme R-10 resulted in 51% viable protoplasts with 3 h digestion. Compared to previously reported protocols, our protoplast isolation method is markedly faster (saving 4.5 h), requires only a small quantity of tissue sample (1 g of leaves) and has high yield (6.5 × 10(5)). The quality of the isolated protoplasts was verified using organelle localization in protoplasts with different organelle markers. Additionally, colocalization analysis of two pineapple Mg(2+) transporter genes in pineapple protoplasts was consistent with the results in a tobacco transient expression system, confirming that the protoplast isolation method can be used to study subcellular localization. Further findings showed that the system is also suitable for protein–protein interaction studies. CONCLUSION: Based on our findings, the presently described method is an efficient and effective strategy for pineapple protoplast isolation and transformation; it is convenient and time saving and provides a greater platform for transformation studies. BioMed Central 2018-10-29 /pmc/articles/PMC6205801/ /pubmed/30386413 http://dx.doi.org/10.1186/s13007-018-0365-9 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Priyadarshani, S. V. G. N. Hu, Bingyan Li, Weimin Ali, Hina Jia, Haifeng Zhao, Lihua Ojolo, Simon Peter Azam, Syed Muhammad Xiong, Junjie Yan, Moakai ur Rahman, Zia Wu, Qingsong Qin, Yuan Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title | Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title_full | Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title_fullStr | Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title_full_unstemmed | Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title_short | Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.) |
title_sort | simple protoplast isolation system for gene expression and protein interaction studies in pineapple (ananas comosus l.) |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6205801/ https://www.ncbi.nlm.nih.gov/pubmed/30386413 http://dx.doi.org/10.1186/s13007-018-0365-9 |
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