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LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study

Background: Neuroblastoma, a neuroendocrine tumor, stems from the developing sympathetic nervous system. Previous genome-wide association studies (GWASs) have discovered a number of neuroblastoma susceptibility genes in Caucasians including LIM domain only 1 (LMO1). Objective: We conducted a three-c...

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Autores principales: He, Lili, Zhu, Jinhong, Han, Fei, Tang, Yingzi, Zhou, Chunlei, Dai, Jincheng, Wang, Yizhen, Zhou, Haixia, He, Jing, Wu, Haiyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6206234/
https://www.ncbi.nlm.nih.gov/pubmed/30406033
http://dx.doi.org/10.3389/fonc.2018.00468
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author He, Lili
Zhu, Jinhong
Han, Fei
Tang, Yingzi
Zhou, Chunlei
Dai, Jincheng
Wang, Yizhen
Zhou, Haixia
He, Jing
Wu, Haiyan
author_facet He, Lili
Zhu, Jinhong
Han, Fei
Tang, Yingzi
Zhou, Chunlei
Dai, Jincheng
Wang, Yizhen
Zhou, Haixia
He, Jing
Wu, Haiyan
author_sort He, Lili
collection PubMed
description Background: Neuroblastoma, a neuroendocrine tumor, stems from the developing sympathetic nervous system. Previous genome-wide association studies (GWASs) have discovered a number of neuroblastoma susceptibility genes in Caucasians including LIM domain only 1 (LMO1). Objective: We conducted a three-center case-control study including 313 cases and 716 controls with the purpose to evaluate the association between five GWAS-identified LMO1 variants (rs110419 A>G, rs4758051 G>A, rs10840002 A>G, rs204938 A>G, and rs2168101 G>T) and neuroblastoma susceptibility in eastern Chinese children. Methods: Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to evaluate the strength of the associations. False positive report possibility (FPRP) analysis was performed to check whether significant results were noteworthy. Results: Significant associations with neuroblastoma risk were found for four (rs110419, rs4758051, rs10840002, and rs2168101) out of the five polymorphisms. Combined analysis demonstrated that carriers of 4–5 protective genotypes had a significantly decreased risk of neuroblastoma in comparison those with 0–3 protective genotypes (adjusted OR = 0.51, 95% CI = 0.39–0.68, P < 0.0001). Haplotype analysis of the five SNPs yield four significant haplotypes associated with neuroblastoma susceptibility. Conclusion: In conclusion, we confirmed LMO1 polymorphisms may reduce neuroblastoma risk in eastern Chinese populations.
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spelling pubmed-62062342018-11-07 LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study He, Lili Zhu, Jinhong Han, Fei Tang, Yingzi Zhou, Chunlei Dai, Jincheng Wang, Yizhen Zhou, Haixia He, Jing Wu, Haiyan Front Oncol Oncology Background: Neuroblastoma, a neuroendocrine tumor, stems from the developing sympathetic nervous system. Previous genome-wide association studies (GWASs) have discovered a number of neuroblastoma susceptibility genes in Caucasians including LIM domain only 1 (LMO1). Objective: We conducted a three-center case-control study including 313 cases and 716 controls with the purpose to evaluate the association between five GWAS-identified LMO1 variants (rs110419 A>G, rs4758051 G>A, rs10840002 A>G, rs204938 A>G, and rs2168101 G>T) and neuroblastoma susceptibility in eastern Chinese children. Methods: Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to evaluate the strength of the associations. False positive report possibility (FPRP) analysis was performed to check whether significant results were noteworthy. Results: Significant associations with neuroblastoma risk were found for four (rs110419, rs4758051, rs10840002, and rs2168101) out of the five polymorphisms. Combined analysis demonstrated that carriers of 4–5 protective genotypes had a significantly decreased risk of neuroblastoma in comparison those with 0–3 protective genotypes (adjusted OR = 0.51, 95% CI = 0.39–0.68, P < 0.0001). Haplotype analysis of the five SNPs yield four significant haplotypes associated with neuroblastoma susceptibility. Conclusion: In conclusion, we confirmed LMO1 polymorphisms may reduce neuroblastoma risk in eastern Chinese populations. Frontiers Media S.A. 2018-10-23 /pmc/articles/PMC6206234/ /pubmed/30406033 http://dx.doi.org/10.3389/fonc.2018.00468 Text en Copyright © 2018 He, Zhu, Han, Tang, Zhou, Dai, Wang, Zhou, He and Wu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
He, Lili
Zhu, Jinhong
Han, Fei
Tang, Yingzi
Zhou, Chunlei
Dai, Jincheng
Wang, Yizhen
Zhou, Haixia
He, Jing
Wu, Haiyan
LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title_full LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title_fullStr LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title_full_unstemmed LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title_short LMO1 Gene Polymorphisms Reduce Neuroblastoma Risk in Eastern Chinese Children: A Three-Center Case-Control Study
title_sort lmo1 gene polymorphisms reduce neuroblastoma risk in eastern chinese children: a three-center case-control study
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6206234/
https://www.ncbi.nlm.nih.gov/pubmed/30406033
http://dx.doi.org/10.3389/fonc.2018.00468
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