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Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis
BACKGROUND: Zuojinwan (ZJW), a classic herbal formula, has been extensively used to treat gastric symptoms in clinical practice in China for centuries. However, the pharmacological mechanisms of ZJW still remain vague to date. METHODS: In the present work, a network pharmacology-based strategy was p...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6211468/ https://www.ncbi.nlm.nih.gov/pubmed/30382864 http://dx.doi.org/10.1186/s12906-018-2356-9 |
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author | Yu, Guohua Wang, Wubin Wang, Xu Xu, Meng Zhang, Lili Ding, Lei Guo, Rui Shi, Yuanyuan |
author_facet | Yu, Guohua Wang, Wubin Wang, Xu Xu, Meng Zhang, Lili Ding, Lei Guo, Rui Shi, Yuanyuan |
author_sort | Yu, Guohua |
collection | PubMed |
description | BACKGROUND: Zuojinwan (ZJW), a classic herbal formula, has been extensively used to treat gastric symptoms in clinical practice in China for centuries. However, the pharmacological mechanisms of ZJW still remain vague to date. METHODS: In the present work, a network pharmacology-based strategy was proposed to elucidate its underlying multi-component, multi-target, and multi-pathway mode of action against gastritis. First we collected putative targets of ZJW based on TCMSP and STITCH databases, and a network containing the interactions between the putative targets of ZJW and known therapeutic targets of gastritis was built. Then four topological parameters, “degree”, “betweenness”, “closeness”, and “coreness” were calculated to identify the major targets in the network. Furthermore, the major hubs were imported to the Metacore database to perform a pathway enrichment analysis. RESULTS: A total of 118 nodes including 59 putative targets of ZJW were picked out as major hubs in terms of their topological importance. The results of pathway enrichment analysis indicated that putative targets of ZJW mostly participated in various pathways associated with anti-inflammation response, growth and development promotion and G-protein-coupled receptor signaling. More importantly, five putative targets of ZJW (EGFR, IL-6, IL-1β, TNF-α and MCP-1) and two known therapeutic targets of gastritis (CCKBR and IL-12β) and a link target NF-κB were recognized as active factors involved in the main biological functions of treatment, implying the underlying mechanisms of ZJW acting on gastritis. CONCLUSION: ZJW could alleviate gastritis through the molecular mechanisms predicted by network pharmacology, and this research demonstrates that the network pharmacology approach can be an effective tool to reveal the mechanisms of traditional Chinese medicine (TCM) from a holistic perspective. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12906-018-2356-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6211468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62114682018-11-08 Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis Yu, Guohua Wang, Wubin Wang, Xu Xu, Meng Zhang, Lili Ding, Lei Guo, Rui Shi, Yuanyuan BMC Complement Altern Med Research Article BACKGROUND: Zuojinwan (ZJW), a classic herbal formula, has been extensively used to treat gastric symptoms in clinical practice in China for centuries. However, the pharmacological mechanisms of ZJW still remain vague to date. METHODS: In the present work, a network pharmacology-based strategy was proposed to elucidate its underlying multi-component, multi-target, and multi-pathway mode of action against gastritis. First we collected putative targets of ZJW based on TCMSP and STITCH databases, and a network containing the interactions between the putative targets of ZJW and known therapeutic targets of gastritis was built. Then four topological parameters, “degree”, “betweenness”, “closeness”, and “coreness” were calculated to identify the major targets in the network. Furthermore, the major hubs were imported to the Metacore database to perform a pathway enrichment analysis. RESULTS: A total of 118 nodes including 59 putative targets of ZJW were picked out as major hubs in terms of their topological importance. The results of pathway enrichment analysis indicated that putative targets of ZJW mostly participated in various pathways associated with anti-inflammation response, growth and development promotion and G-protein-coupled receptor signaling. More importantly, five putative targets of ZJW (EGFR, IL-6, IL-1β, TNF-α and MCP-1) and two known therapeutic targets of gastritis (CCKBR and IL-12β) and a link target NF-κB were recognized as active factors involved in the main biological functions of treatment, implying the underlying mechanisms of ZJW acting on gastritis. CONCLUSION: ZJW could alleviate gastritis through the molecular mechanisms predicted by network pharmacology, and this research demonstrates that the network pharmacology approach can be an effective tool to reveal the mechanisms of traditional Chinese medicine (TCM) from a holistic perspective. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12906-018-2356-9) contains supplementary material, which is available to authorized users. BioMed Central 2018-11-01 /pmc/articles/PMC6211468/ /pubmed/30382864 http://dx.doi.org/10.1186/s12906-018-2356-9 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Yu, Guohua Wang, Wubin Wang, Xu Xu, Meng Zhang, Lili Ding, Lei Guo, Rui Shi, Yuanyuan Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title | Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title_full | Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title_fullStr | Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title_full_unstemmed | Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title_short | Network pharmacology-based strategy to investigate pharmacological mechanisms of Zuojinwan for treatment of gastritis |
title_sort | network pharmacology-based strategy to investigate pharmacological mechanisms of zuojinwan for treatment of gastritis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6211468/ https://www.ncbi.nlm.nih.gov/pubmed/30382864 http://dx.doi.org/10.1186/s12906-018-2356-9 |
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