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Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential

Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD...

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Autores principales: Pinto, Cátia, Sousa, Susana, Froufe, Hugo, Egas, Conceição, Clément, Christophe, Fontaine, Florence, Gomes, Ana C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6211603/
https://www.ncbi.nlm.nih.gov/pubmed/30410642
http://dx.doi.org/10.1186/s40793-018-0327-x
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author Pinto, Cátia
Sousa, Susana
Froufe, Hugo
Egas, Conceição
Clément, Christophe
Fontaine, Florence
Gomes, Ana C
author_facet Pinto, Cátia
Sousa, Susana
Froufe, Hugo
Egas, Conceição
Clément, Christophe
Fontaine, Florence
Gomes, Ana C
author_sort Pinto, Cátia
collection PubMed
description Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0327-x) contains supplementary material, which is available to authorized users.
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spelling pubmed-62116032018-11-08 Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential Pinto, Cátia Sousa, Susana Froufe, Hugo Egas, Conceição Clément, Christophe Fontaine, Florence Gomes, Ana C Stand Genomic Sci Extended Genome Report Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-018-0327-x) contains supplementary material, which is available to authorized users. BioMed Central 2018-11-01 /pmc/articles/PMC6211603/ /pubmed/30410642 http://dx.doi.org/10.1186/s40793-018-0327-x Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Extended Genome Report
Pinto, Cátia
Sousa, Susana
Froufe, Hugo
Egas, Conceição
Clément, Christophe
Fontaine, Florence
Gomes, Ana C
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_full Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_fullStr Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_full_unstemmed Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_short Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_sort draft genome sequence of bacillus amyloliquefaciens subsp. plantarum strain fito_f321, an endophyte microorganism from vitis vinifera with biocontrol potential
topic Extended Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6211603/
https://www.ncbi.nlm.nih.gov/pubmed/30410642
http://dx.doi.org/10.1186/s40793-018-0327-x
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