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Advances in DNA Barcoding of Toxic Marine Organisms
There are more than 200,000 marine species worldwide. These include many important economic species, such as large yellow croaker, ribbonfish, tuna, and salmon, but also many potentially toxic species, such as blue-green algae, diatoms, cnidarians, ctenophores, Nassarius spp., and pufferfish. Howeve...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6213214/ https://www.ncbi.nlm.nih.gov/pubmed/30261656 http://dx.doi.org/10.3390/ijms19102931 |
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author | Gong, Shaohua Ding, Yanfei Wang, Yi Jiang, Guangze Zhu, Cheng |
author_facet | Gong, Shaohua Ding, Yanfei Wang, Yi Jiang, Guangze Zhu, Cheng |
author_sort | Gong, Shaohua |
collection | PubMed |
description | There are more than 200,000 marine species worldwide. These include many important economic species, such as large yellow croaker, ribbonfish, tuna, and salmon, but also many potentially toxic species, such as blue-green algae, diatoms, cnidarians, ctenophores, Nassarius spp., and pufferfish. However, some edible and toxic species may look similar, and the correct identification of marine species is thus a major issue. The failure of traditional classification methods in certain species has promoted the use of DNA barcoding, which uses short, standard DNA fragments to assist with species identification. In this review, we summarize recent advances in DNA barcoding of toxic marine species such as jellyfish and pufferfish, using genes including cytochrome oxidase I gene (COI), cytochrome b gene (cytb), 16S rDNA, internal transcribed spacer (ITS), and Ribulose-1,5-bisphosphate carboxylase oxygenase gene (rbcL). We also discuss the application of this technique for improving the identification of marine species. The use of DNA barcoding can benefit the studies of biological diversity, biogeography, food safety, and the detection of both invasive and new species. However, the technique has limitations, particularly for the analysis of complex objects and the selection of standard DNA barcodes. The development of high-throughput methods may offer solutions to some of these issues. |
format | Online Article Text |
id | pubmed-6213214 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62132142018-11-14 Advances in DNA Barcoding of Toxic Marine Organisms Gong, Shaohua Ding, Yanfei Wang, Yi Jiang, Guangze Zhu, Cheng Int J Mol Sci Review There are more than 200,000 marine species worldwide. These include many important economic species, such as large yellow croaker, ribbonfish, tuna, and salmon, but also many potentially toxic species, such as blue-green algae, diatoms, cnidarians, ctenophores, Nassarius spp., and pufferfish. However, some edible and toxic species may look similar, and the correct identification of marine species is thus a major issue. The failure of traditional classification methods in certain species has promoted the use of DNA barcoding, which uses short, standard DNA fragments to assist with species identification. In this review, we summarize recent advances in DNA barcoding of toxic marine species such as jellyfish and pufferfish, using genes including cytochrome oxidase I gene (COI), cytochrome b gene (cytb), 16S rDNA, internal transcribed spacer (ITS), and Ribulose-1,5-bisphosphate carboxylase oxygenase gene (rbcL). We also discuss the application of this technique for improving the identification of marine species. The use of DNA barcoding can benefit the studies of biological diversity, biogeography, food safety, and the detection of both invasive and new species. However, the technique has limitations, particularly for the analysis of complex objects and the selection of standard DNA barcodes. The development of high-throughput methods may offer solutions to some of these issues. MDPI 2018-09-26 /pmc/articles/PMC6213214/ /pubmed/30261656 http://dx.doi.org/10.3390/ijms19102931 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Gong, Shaohua Ding, Yanfei Wang, Yi Jiang, Guangze Zhu, Cheng Advances in DNA Barcoding of Toxic Marine Organisms |
title | Advances in DNA Barcoding of Toxic Marine Organisms |
title_full | Advances in DNA Barcoding of Toxic Marine Organisms |
title_fullStr | Advances in DNA Barcoding of Toxic Marine Organisms |
title_full_unstemmed | Advances in DNA Barcoding of Toxic Marine Organisms |
title_short | Advances in DNA Barcoding of Toxic Marine Organisms |
title_sort | advances in dna barcoding of toxic marine organisms |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6213214/ https://www.ncbi.nlm.nih.gov/pubmed/30261656 http://dx.doi.org/10.3390/ijms19102931 |
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