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Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans

Normal growth and development, as well as adaptive responses to various intracellular and environmental stresses, are tightly controlled by transcriptional networks. The evolutionarily conserved genomic sequences across species highlights the architecture of such certain regulatory elements. Among t...

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Autores principales: Zhu, Yu-Ping, Wang, Meng, Xiang, Yuancai, Qiu, Lu, Hu, Shaofan, Zhang, Zhengwen, Mattjus, Peter, Zhu, Xiaomei, Zhang, Yiguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6213907/
https://www.ncbi.nlm.nih.gov/pubmed/30261635
http://dx.doi.org/10.3390/ijms19102927
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author Zhu, Yu-Ping
Wang, Meng
Xiang, Yuancai
Qiu, Lu
Hu, Shaofan
Zhang, Zhengwen
Mattjus, Peter
Zhu, Xiaomei
Zhang, Yiguo
author_facet Zhu, Yu-Ping
Wang, Meng
Xiang, Yuancai
Qiu, Lu
Hu, Shaofan
Zhang, Zhengwen
Mattjus, Peter
Zhu, Xiaomei
Zhang, Yiguo
author_sort Zhu, Yu-Ping
collection PubMed
description Normal growth and development, as well as adaptive responses to various intracellular and environmental stresses, are tightly controlled by transcriptional networks. The evolutionarily conserved genomic sequences across species highlights the architecture of such certain regulatory elements. Among them, one of the most conserved transcription factors is the basic-region leucine zipper (bZIP) family. Herein, we have performed phylogenetic analysis of these bZIP proteins and found, to our surprise, that there exist a few homologous proteins of the family members Jun, Fos, ATF2, BATF, C/EBP and CNC (cap’n’collar) in either viruses or bacteria, albeit expansion and diversification of this bZIP superfamily have occurred in vertebrates from metazoan. Interestingly, a specific group of bZIP proteins is identified, designated Nach (Nrf and CNC homology), because of their strong conservation with all the known CNC and NF-E2 p45 subunit-related factors Nrf1 and Nrf2. Further experimental evidence has also been provided, revealing that Nach1 and Nach2 from the marine bacteria exert distinctive functions, when compared with human Nrf1 and Nrf2, in the transcriptional regulation of antioxidant response element (ARE)-battery genes. Collectively, further insights into these Nach/CNC-bZIP subfamily transcription factors provide a novel better understanding of distinct biological functions of these factors expressed in distinct species from the marine bacteria to humans.
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spelling pubmed-62139072018-11-14 Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans Zhu, Yu-Ping Wang, Meng Xiang, Yuancai Qiu, Lu Hu, Shaofan Zhang, Zhengwen Mattjus, Peter Zhu, Xiaomei Zhang, Yiguo Int J Mol Sci Article Normal growth and development, as well as adaptive responses to various intracellular and environmental stresses, are tightly controlled by transcriptional networks. The evolutionarily conserved genomic sequences across species highlights the architecture of such certain regulatory elements. Among them, one of the most conserved transcription factors is the basic-region leucine zipper (bZIP) family. Herein, we have performed phylogenetic analysis of these bZIP proteins and found, to our surprise, that there exist a few homologous proteins of the family members Jun, Fos, ATF2, BATF, C/EBP and CNC (cap’n’collar) in either viruses or bacteria, albeit expansion and diversification of this bZIP superfamily have occurred in vertebrates from metazoan. Interestingly, a specific group of bZIP proteins is identified, designated Nach (Nrf and CNC homology), because of their strong conservation with all the known CNC and NF-E2 p45 subunit-related factors Nrf1 and Nrf2. Further experimental evidence has also been provided, revealing that Nach1 and Nach2 from the marine bacteria exert distinctive functions, when compared with human Nrf1 and Nrf2, in the transcriptional regulation of antioxidant response element (ARE)-battery genes. Collectively, further insights into these Nach/CNC-bZIP subfamily transcription factors provide a novel better understanding of distinct biological functions of these factors expressed in distinct species from the marine bacteria to humans. MDPI 2018-09-26 /pmc/articles/PMC6213907/ /pubmed/30261635 http://dx.doi.org/10.3390/ijms19102927 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhu, Yu-Ping
Wang, Meng
Xiang, Yuancai
Qiu, Lu
Hu, Shaofan
Zhang, Zhengwen
Mattjus, Peter
Zhu, Xiaomei
Zhang, Yiguo
Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title_full Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title_fullStr Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title_full_unstemmed Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title_short Nach Is a Novel Subgroup at an Early Evolutionary Stage of the CNC-bZIP Subfamily Transcription Factors from the Marine Bacteria to Humans
title_sort nach is a novel subgroup at an early evolutionary stage of the cnc-bzip subfamily transcription factors from the marine bacteria to humans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6213907/
https://www.ncbi.nlm.nih.gov/pubmed/30261635
http://dx.doi.org/10.3390/ijms19102927
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