Cargando…

A Genome-Wide Association Study Reveals Candidate Genes Related to Salt Tolerance in Rice (Oryza sativa) at the Germination Stage

Salt toxicity is the major factor limiting crop productivity in saline soils. In this paper, 295 accessions including a heuristic core set (137 accessions) and 158 bred varieties were re-sequenced and ~1.65 million SNPs/indels were used to perform a genome-wide association study (GWAS) of salt-toler...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yu, Jie, Zhao, Weiguo, Tong, Wei, He, Qiang, Yoon, Min-Young, Li, Feng-Peng, Choi, Buung, Heo, Eun-Beom, Kim, Kyu-Won, Park, Yong-Jin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6213974/ https://www.ncbi.nlm.nih.gov/pubmed/30322083 http://dx.doi.org/10.3390/ijms19103145

Ejemplares similares

Candidate gene discovery for salt tolerance in rice (Oryza sativa L.) at the germination stage based on genome-wide association study
por: Ju, Chunyan, et al.
Publicado: (2022)

Genome-Wide Association Study Reveals a Genetic Mechanism of Salt Tolerance Germinability in Rice (Oryza sativa L.)
por: Li, Caijing, et al.
Publicado: (2022)

Mapping QTLs for cold tolerance at germination and the early seedling stage in rice (Oryza sativa L.)
por: Ranawake, Aloka Lanka, et al.
Publicado: (2014)

Genome wide association analysis of cold tolerance at germination in temperate japonica rice (Oryza sativa L.) varieties
por: Sales, Ester, et al.
Publicado: (2017)

Genome-wide association mapping of salinity tolerance in rice (Oryza sativa)
por: Kumar, Vinod, et al.
Publicado: (2015)

Suppression of microRNA168 enhances salt tolerance in rice (Oryza sativa L.)
por: Wan, Jiong, et al.
Publicado: (2022)

Characterization of Salt-Induced Epigenetic Segregation by Genome-Wide Loss of Heterozygosity and its Association with Salt Tolerance in Rice (Oryza sativa L.)
por: Li, Min, et al.
Publicado: (2017)

Mapping the N-linked glycosites of rice (Oryza sativa L.) germinating embryos
por: Ying, Jiezheng, et al.
Publicado: (2017)

Tolerance of anaerobic conditions caused by flooding during germination and early growth in rice (Oryza sativa L.)
por: Miro, Berta, et al.
Publicado: (2013)

Genome-wide association study of salt tolerance at the seed germination stage in rice
por: Shi, Yingyao, et al.
Publicado: (2017)

The Candidate Genes Underlying a Stably Expressed QTL for Low Temperature Germinability in Rice (Oryza sativa L.)
por: Yang, Tifeng, et al.
Publicado: (2020)

QTL mapping and candidate gene analysis of low temperature germination in rice (Oryza sativa L.) using a genome wide association study
por: Mao, Feng, et al.
Publicado: (2022)

Meta-Analysis of Quantitative Trait Loci Associated with Seedling-Stage Salt Tolerance in Rice (Oryza sativa L.)
por: Islam, Md. Shofiqul, et al.
Publicado: (2019)

QTL mapping and identification of candidate genes using a genome-wide association study for heat tolerance at anthesis in rice (Oryza sativa L.)
por: Hu, Changmin, et al.
Publicado: (2022)

Serine carboxypeptidase 46 Regulates Grain Filling and Seed Germination in Rice (Oryza sativa L.)
por: Li, Zhiyong, et al.
Publicado: (2016)

Molecular Breeding to Improve Salt Tolerance of Rice (Oryza sativa L.) in the Red River Delta of Vietnam
por: Linh, Le Hung, et al.
Publicado: (2012)

Simultaneous Improvement and Genetic Dissection of Salt Tolerance of Rice (Oryza sativa L.) by Designed QTL Pyramiding
por: Pang, Yunlong, et al.
Publicado: (2017)

Haplotype analysis and marker development of five salt-tolerant–related genes in rice (Oryza sativa L.)
por: Li, Pingbo, et al.
Publicado: (2023)

Quantitative Proteomic Analysis of the Rice (Oryza sativa L.) Salt Response
por: Xu, Jianwen, et al.
Publicado: (2015)

Genome-wide response to selection and genetic basis of cold tolerance in rice (Oryza sativa L.)
por: Zhang, Fan, et al.
Publicado: (2014)

Biallelic and Genome Wide Association Mapping of Germanium Tolerant Loci in Rice (Oryza sativa L.)
por: Talukdar, Partha, et al.
Publicado: (2015)

Identification of QTLs for Salt Tolerance at the Germination and Seedling Stages in Rice
por: Nakhla, Walid Raafat, et al.
Publicado: (2021)

Identification of a Major QTL and Candidate Gene Analysis of Salt Tolerance at the Bud Burst Stage in Rice (Oryza sativa L.) Using QTL-Seq and RNA-Seq
por: Lei, Lei, et al.
Publicado: (2020)

Combining GWAS, Genome-Wide Domestication and a Transcriptomic Analysis Reveals the Loci and Natural Alleles of Salt Tolerance in Rice (Oryza sativa L.)
por: Lv, Yang, et al.
Publicado: (2022)

Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed
por: Ruan, Song-Lin, et al.
Publicado: (2011)

Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (Oryza sativa)
por: Naithani, Sushma, et al.
Publicado: (2023)

Integration of QTL Mapping and Whole Genome Sequencing Identifies Candidate Genes for Alkalinity Tolerance in Rice (Oryza sativa)
por: Singh, Lovepreet, et al.
Publicado: (2022)

Genetic dissection of ozone tolerance in rice (Oryza sativa L.) by a genome-wide association study
por: Ueda, Yoshiaki, et al.
Publicado: (2015)

Seed Germination Ecology of Echinochloa glabrescens and Its Implication for Management in Rice (Oryza sativa L.)
por: Opeña, Jhoana L., et al.
Publicado: (2014)

Green Processing, Germinating and Wet Milling Brown Rice (Oryza sativa) for Beverages: Physicochemical Effects
por: Beaulieu, John C., et al.
Publicado: (2020)

Comparative Metabolomics Reveals Two Metabolic Modules Affecting Seed Germination in Rice (Oryza sativa)
por: Guo, Hao, et al.
Publicado: (2021)

Dynamic Changes in Vitamin E Biosynthesis during Germination in Brown Rice (Oryza sativa L.)
por: Kong, Leilei, et al.
Publicado: (2022)

Effect of Silica-Based Nanomaterials on Seed Germination and Seedling Growth of Rice (Oryza sativa L.)
por: Jiang, Yaqi, et al.
Publicado: (2022)

Identification of QTLs involved in cold tolerance during the germination and bud stages of rice (Oryza sativa L.) via a high-density genetic map
por: Yang, Jing, et al.
Publicado: (2020)

Genetic variability analysis of partially salt tolerant local and inbred rice (Oryza sativa L.) through molecular markers
por: Mazumder, Sonia Rani, et al.
Publicado: (2020)

Identification of Candidate Genes for Salinity and Anaerobic Tolerance at the Germination Stage in Rice by Genome-Wide Association Analyses
por: Islam, Mohammad Rafiqul, et al.
Publicado: (2022)

Genome-wide analysis of fatty acid desaturase genes in rice (Oryza sativa L.)
por: E, Zhiguo, et al.
Publicado: (2019)

Identification and analysis of novel salt responsive candidate gene based SSRs (cgSSRs) from rice (Oryza sativa L.)
por: Molla, Kutubuddin Ali, et al.
Publicado: (2015)

Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis
por: Shakiba, Ehsan, et al.
Publicado: (2017)

Root Response to Drought Stress in Rice (Oryza sativa L.)
por: Kim, Yoonha, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_0h9terckrqft10j3oevae7lsl3