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Identifying network structure similarity using spectral graph theory

Most real networks are too large or they are not available for real time analysis. Therefore, in practice, decisions are made based on partial information about the ground truth network. It is of great interest to have metrics to determine if an inferred network (the partial information network) is...

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Detalles Bibliográficos
Autores principales: Gera, Ralucca, Alonso, L., Crawford, Brian, House, Jeffrey, Mendez-Bermudez, J. A., Knuth, Thomas, Miller, Ryan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6214265/
https://www.ncbi.nlm.nih.gov/pubmed/30839726
http://dx.doi.org/10.1007/s41109-017-0042-3
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author Gera, Ralucca
Alonso, L.
Crawford, Brian
House, Jeffrey
Mendez-Bermudez, J. A.
Knuth, Thomas
Miller, Ryan
author_facet Gera, Ralucca
Alonso, L.
Crawford, Brian
House, Jeffrey
Mendez-Bermudez, J. A.
Knuth, Thomas
Miller, Ryan
author_sort Gera, Ralucca
collection PubMed
description Most real networks are too large or they are not available for real time analysis. Therefore, in practice, decisions are made based on partial information about the ground truth network. It is of great interest to have metrics to determine if an inferred network (the partial information network) is similar to the ground truth. In this paper we develop a test for similarity between the inferred and the true network. Our research utilizes a network visualization tool, which systematically discovers a network, producing a sequence of snapshots of the network. We introduce and test our metric on the consecutive snapshots of a network, and against the ground truth. To test the scalability of our metric we use a random matrix theory approach while discovering Erdös-Rényi graphs. This scaling analysis allows us to make predictions about the performance of the discovery process.
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spelling pubmed-62142652018-11-13 Identifying network structure similarity using spectral graph theory Gera, Ralucca Alonso, L. Crawford, Brian House, Jeffrey Mendez-Bermudez, J. A. Knuth, Thomas Miller, Ryan Appl Netw Sci Research Most real networks are too large or they are not available for real time analysis. Therefore, in practice, decisions are made based on partial information about the ground truth network. It is of great interest to have metrics to determine if an inferred network (the partial information network) is similar to the ground truth. In this paper we develop a test for similarity between the inferred and the true network. Our research utilizes a network visualization tool, which systematically discovers a network, producing a sequence of snapshots of the network. We introduce and test our metric on the consecutive snapshots of a network, and against the ground truth. To test the scalability of our metric we use a random matrix theory approach while discovering Erdös-Rényi graphs. This scaling analysis allows us to make predictions about the performance of the discovery process. Springer International Publishing 2018-01-31 2018 /pmc/articles/PMC6214265/ /pubmed/30839726 http://dx.doi.org/10.1007/s41109-017-0042-3 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Gera, Ralucca
Alonso, L.
Crawford, Brian
House, Jeffrey
Mendez-Bermudez, J. A.
Knuth, Thomas
Miller, Ryan
Identifying network structure similarity using spectral graph theory
title Identifying network structure similarity using spectral graph theory
title_full Identifying network structure similarity using spectral graph theory
title_fullStr Identifying network structure similarity using spectral graph theory
title_full_unstemmed Identifying network structure similarity using spectral graph theory
title_short Identifying network structure similarity using spectral graph theory
title_sort identifying network structure similarity using spectral graph theory
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6214265/
https://www.ncbi.nlm.nih.gov/pubmed/30839726
http://dx.doi.org/10.1007/s41109-017-0042-3
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